Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 AC144831.1-201ENST00000573312 2656 ntBASIC14.43□□□□□ -0.1
NKX6-2Q9C056 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 AC112777.1-201ENST00000540175 1423 ntBASIC14.43□□□□□ -0.1
NKX6-2Q9C056 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 KRT18P16-201ENST00000510337 1294 ntBASIC14.43□□□□□ -0.1
NKX6-2Q9C056 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 AC137761.2-201ENST00000561729 223 ntBASIC14.43□□□□□ -0.1
NKX6-2Q9C056 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 AC145350.3-201ENST00000569033 163 ntBASIC14.43□□□□□ -0.1
NKX6-2Q9C056 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 C8orf49-201ENST00000525043 1968 ntBASIC14.43□□□□□ -0.1
NKX6-2Q9C056 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.43□□□□□ -0.1
NKX6-2Q9C056 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NKX6-2Q9C056 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 AC092384.3-202ENST00000564646 2873 ntBASIC14.42□□□□□ -0.1
NKX6-2Q9C056 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms