Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.17□□□□□ -0.14
CHRDL1Q9BU40 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 LINC01126-201ENST00000623515 1646 ntBASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 SLC25A3P1-201ENST00000443844 931 ntBASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 AC063926.3-201ENST00000624734 5658 ntBASIC14.16□□□□□ -0.14
CHRDL1Q9BU40 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 AC141257.4-201ENST00000634557 245 ntBASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 AC136944.6-201ENST00000634818 245 ntBASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 AC133561.5-201ENST00000635547 218 ntBASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHRDL1Q9BU40 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms