Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC27.6■■■□□ 2.01
CFAP43Q8NDM7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC27.6■■■□□ 2.01
CFAP43Q8NDM7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 HLA-DQB1-201ENST00000374943 1656 ntBASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 FUT8-AS1-201ENST00000621019 1521 ntBASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
CFAP43Q8NDM7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CFAP43Q8NDM7 NCF1C-201ENST00000438382 1427 ntBASIC27.58■■■□□ 2.01
CFAP43Q8NDM7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CFAP43Q8NDM7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CFAP43Q8NDM7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CFAP43Q8NDM7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC27.58■■■□□ 2.01
CFAP43Q8NDM7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CFAP43Q8NDM7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CFAP43Q8NDM7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC27.58■■■□□ 2.01
CFAP43Q8NDM7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC27.58■■■□□ 2.01
CFAP43Q8NDM7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC27.58■■■□□ 2.01
CFAP43Q8NDM7 AC008667.4-201ENST00000607370 168 ntBASIC27.58■■■□□ 2.01
CFAP43Q8NDM7 AL589182.2-201ENST00000619332 1049 ntBASIC27.58■■■□□ 2.01
CFAP43Q8NDM7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2.01
CFAP43Q8NDM7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CFAP43Q8NDM7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC27.58■■■□□ 2
CFAP43Q8NDM7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC27.58■■■□□ 2
CFAP43Q8NDM7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC27.58■■■□□ 2
CFAP43Q8NDM7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CFAP43Q8NDM7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC27.57■■■□□ 2
CFAP43Q8NDM7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC27.57■■■□□ 2
CFAP43Q8NDM7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CFAP43Q8NDM7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC27.57■■■□□ 2
CFAP43Q8NDM7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC27.57■■■□□ 2
CFAP43Q8NDM7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC27.57■■■□□ 2
CFAP43Q8NDM7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC27.57■■■□□ 2
CFAP43Q8NDM7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC27.57■■■□□ 2
CFAP43Q8NDM7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
CFAP43Q8NDM7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CFAP43Q8NDM7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC27.57■■■□□ 2
CFAP43Q8NDM7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CFAP43Q8NDM7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
CFAP43Q8NDM7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC27.57■■■□□ 2
CFAP43Q8NDM7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CFAP43Q8NDM7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC27.57■■■□□ 2
CFAP43Q8NDM7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC27.56■■■□□ 2
CFAP43Q8NDM7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
CFAP43Q8NDM7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CFAP43Q8NDM7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC27.56■■■□□ 2
CFAP43Q8NDM7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC27.56■■■□□ 2
CFAP43Q8NDM7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
CFAP43Q8NDM7 ADH5P3-201ENST00000433842 1137 ntBASIC27.56■■■□□ 2
CFAP43Q8NDM7 SIRPAP1-201ENST00000448467 1770 ntBASIC27.56■■■□□ 2
CFAP43Q8NDM7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC27.56■■■□□ 2
CFAP43Q8NDM7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CFAP43Q8NDM7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC27.56■■■□□ 2
CFAP43Q8NDM7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC27.56■■■□□ 2
CFAP43Q8NDM7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC27.56■■■□□ 2
CFAP43Q8NDM7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC27.56■■■□□ 2
CFAP43Q8NDM7 AC006504.4-201ENST00000592118 1568 ntBASIC27.56■■■□□ 2
CFAP43Q8NDM7 AC004706.3-202ENST00000621574 984 ntBASIC27.56■■■□□ 2
CFAP43Q8NDM7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC27.56■■■□□ 2
CFAP43Q8NDM7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC27.56■■■□□ 2
CFAP43Q8NDM7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC27.56■■■□□ 2
CFAP43Q8NDM7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CFAP43Q8NDM7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC27.56■■■□□ 2
CFAP43Q8NDM7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC27.56■■■□□ 2
CFAP43Q8NDM7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CFAP43Q8NDM7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC27.56■■■□□ 2
CFAP43Q8NDM7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CFAP43Q8NDM7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC27.56■■■□□ 2
CFAP43Q8NDM7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms