Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC246785.2-201ENST00000432512 513 ntBASIC17.15■□□□□ 0.34
SLC6A12P48065 AC007967.3-201ENST00000434308 558 ntBASIC17.15■□□□□ 0.34
SLC6A12P48065 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A12P48065 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A12P48065 AC087388.1-201ENST00000571370 1112 ntBASIC17.15■□□□□ 0.34
SLC6A12P48065 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC6A12P48065 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC6A12P48065 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SLC6A12P48065 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
SLC6A12P48065 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A12P48065 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC6A12P48065 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A12P48065 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SLC6A12P48065 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
SLC6A12P48065 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SLC6A12P48065 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC6A12P48065 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC6A12P48065 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.14■□□□□ 0.33
SLC6A12P48065 AC011840.4-201ENST00000578471 627 ntBASIC17.14■□□□□ 0.33
SLC6A12P48065 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SLC6A12P48065 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC6A12P48065 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SLC6A12P48065 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC6A12P48065 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC6A12P48065 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
SLC6A12P48065 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A12P48065 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC6A12P48065 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A12P48065 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SLC6A12P48065 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A12P48065 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A12P48065 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A12P48065 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A12P48065 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A12P48065 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A12P48065 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A12P48065 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A12P48065 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SLC6A12P48065 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC6A12P48065 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A12P48065 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A12P48065 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
SLC6A12P48065 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC6A12P48065 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC6A12P48065 AC091607.1-201ENST00000490318 1060 ntBASIC17.13■□□□□ 0.33
SLC6A12P48065 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC6A12P48065 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.13■□□□□ 0.33
SLC6A12P48065 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC6A12P48065 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC6A12P48065 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC6A12P48065 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
SLC6A12P48065 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC6A12P48065 AC108860.2-201ENST00000562760 2183 ntBASIC17.13■□□□□ 0.33
SLC6A12P48065 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC6A12P48065 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC6A12P48065 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A12P48065 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SLC6A12P48065 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A12P48065 IER3-202ENST00000376377 1350 ntBASIC17.13■□□□□ 0.33
SLC6A12P48065 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SLC6A12P48065 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A12P48065 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC6A12P48065 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A12P48065 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC6A12P48065 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A12P48065 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A12P48065 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC6A12P48065 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A12P48065 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A12P48065 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC6A12P48065 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A12P48065 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A12P48065 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A12P48065 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SLC6A12P48065 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A12P48065 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC6A12P48065 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC6A12P48065 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC6A12P48065 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC6A12P48065 AC002558.1-201ENST00000488906 803 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms