Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB4AP20338 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB4AP20338 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB4AP20338 AC097376.2-205ENST00000610159 5334 ntBASIC13.66□□□□□ -0.22
RAB4AP20338 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB4AP20338 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB4AP20338 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RAB4AP20338 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RAB4AP20338 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB4AP20338 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB4AP20338 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.66□□□□□ -0.22
RAB4AP20338 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB4AP20338 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
RAB4AP20338 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
RAB4AP20338 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 STX7-201ENST00000367937 1090 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB4AP20338 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RAB4AP20338 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC13.66□□□□□ -0.22
RAB4AP20338 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB4AP20338 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC13.66□□□□□ -0.22
RAB4AP20338 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.66□□□□□ -0.22
RAB4AP20338 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB4AP20338 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB4AP20338 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RAB4AP20338 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB4AP20338 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB4AP20338 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB4AP20338 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RAB4AP20338 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB4AP20338 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB4AP20338 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.66□□□□□ -0.22
RAB4AP20338 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
RAB4AP20338 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
RAB4AP20338 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB4AP20338 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.65□□□□□ -0.22
RAB4AP20338 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 AC073210.2-201ENST00000430369 194 ntBASIC13.65□□□□□ -0.22
RAB4AP20338 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 NTF6G-201ENST00000591094 616 ntBASIC13.65□□□□□ -0.22
RAB4AP20338 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 OR10C1-204ENST00000622521 1039 ntBASIC13.65□□□□□ -0.22
RAB4AP20338 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB4AP20338 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB4AP20338 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
RAB4AP20338 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.65□□□□□ -0.23
RAB4AP20338 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
RAB4AP20338 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RAB4AP20338 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB4AP20338 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB4AP20338 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB4AP20338 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms