Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2AFXP16104 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
H2AFXP16104 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2AFXP16104 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2AFXP16104 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
H2AFXP16104 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
H2AFXP16104 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
H2AFXP16104 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
H2AFXP16104 AC092368.3-202ENST00000574180 1591 ntBASIC18.47■□□□□ 0.55
H2AFXP16104 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.47■□□□□ 0.55
H2AFXP16104 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 AL023284.2-201ENST00000405850 579 ntBASIC18.47■□□□□ 0.55
H2AFXP16104 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
H2AFXP16104 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 AC092118.2-201ENST00000613495 667 ntBASIC18.47■□□□□ 0.55
H2AFXP16104 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
H2AFXP16104 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 AC092364.2-201ENST00000596710 2692 ntBASIC18.47■□□□□ 0.55
H2AFXP16104 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.47■□□□□ 0.55
H2AFXP16104 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
H2AFXP16104 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
H2AFXP16104 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.47■□□□□ 0.55
H2AFXP16104 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
H2AFXP16104 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H2AFXP16104 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.46■□□□□ 0.55
H2AFXP16104 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
H2AFXP16104 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2AFXP16104 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.46■□□□□ 0.55
H2AFXP16104 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2AFXP16104 AC144831.1-201ENST00000573312 2656 ntBASIC18.46■□□□□ 0.55
H2AFXP16104 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2AFXP16104 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.46■□□□□ 0.55
H2AFXP16104 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.46■□□□□ 0.55
H2AFXP16104 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.46■□□□□ 0.55
H2AFXP16104 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
H2AFXP16104 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
H2AFXP16104 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.46■□□□□ 0.55
H2AFXP16104 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
H2AFXP16104 KRT8P9-201ENST00000558927 1449 ntBASIC18.46■□□□□ 0.55
H2AFXP16104 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2AFXP16104 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2AFXP16104 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.46■□□□□ 0.55
H2AFXP16104 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.46■□□□□ 0.55
H2AFXP16104 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
H2AFXP16104 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2AFXP16104 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2AFXP16104 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H2AFXP16104 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.45■□□□□ 0.54
H2AFXP16104 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC18.45■□□□□ 0.54
H2AFXP16104 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2AFXP16104 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2AFXP16104 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
H2AFXP16104 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
H2AFXP16104 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2AFXP16104 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2AFXP16104 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2AFXP16104 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.45■□□□□ 0.54
H2AFXP16104 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2AFXP16104 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.45■□□□□ 0.54
H2AFXP16104 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2AFXP16104 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
H2AFXP16104 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
H2AFXP16104 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H2AFXP16104 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H2AFXP16104 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.45■□□□□ 0.54
H2AFXP16104 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.45■□□□□ 0.54
H2AFXP16104 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.45■□□□□ 0.54
H2AFXP16104 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
H2AFXP16104 AL139246.5-201ENST00000606645 996 ntBASIC18.45■□□□□ 0.54
H2AFXP16104 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
H2AFXP16104 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2AFXP16104 AC036111.1-201ENST00000533973 1582 ntBASIC18.45■□□□□ 0.54
H2AFXP16104 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.45■□□□□ 0.54
H2AFXP16104 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
H2AFXP16104 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2AFXP16104 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.45■□□□□ 0.54
H2AFXP16104 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
H2AFXP16104 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
H2AFXP16104 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms