Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
PF4V1P10720 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.12□□□□□ -0.15
PF4V1P10720 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
PF4V1P10720 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.11□□□□□ -0.15
PF4V1P10720 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.11□□□□□ -0.15
PF4V1P10720 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.11□□□□□ -0.15
PF4V1P10720 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.11□□□□□ -0.15
PF4V1P10720 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.11□□□□□ -0.15
PF4V1P10720 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 AL096828.2-201ENST00000567259 1965 ntBASIC14.11□□□□□ -0.15
PF4V1P10720 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
PF4V1P10720 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
PF4V1P10720 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.11□□□□□ -0.15
PF4V1P10720 NUS1P2-201ENST00000417358 873 ntBASIC14.11□□□□□ -0.15
PF4V1P10720 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.11□□□□□ -0.15
PF4V1P10720 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.11□□□□□ -0.15
PF4V1P10720 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.11□□□□□ -0.15
PF4V1P10720 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PF4V1P10720 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.11□□□□□ -0.15
PF4V1P10720 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.11□□□□□ -0.15
PF4V1P10720 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.11□□□□□ -0.15
PF4V1P10720 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.11□□□□□ -0.15
PF4V1P10720 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PF4V1P10720 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.11□□□□□ -0.15
PF4V1P10720 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
PF4V1P10720 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PF4V1P10720 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
PF4V1P10720 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
PF4V1P10720 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.1□□□□□ -0.15
PF4V1P10720 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.1□□□□□ -0.15
PF4V1P10720 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.1□□□□□ -0.15
PF4V1P10720 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PF4V1P10720 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PF4V1P10720 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.1□□□□□ -0.15
PF4V1P10720 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PF4V1P10720 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.1□□□□□ -0.15
PF4V1P10720 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PF4V1P10720 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PF4V1P10720 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.1□□□□□ -0.15
PF4V1P10720 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.1□□□□□ -0.15
PF4V1P10720 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PF4V1P10720 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.1□□□□□ -0.15
PF4V1P10720 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.1□□□□□ -0.15
PF4V1P10720 REXO1L9P-201ENST00000604264 2108 ntBASIC14.1□□□□□ -0.15
PF4V1P10720 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.1□□□□□ -0.15
PF4V1P10720 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.1□□□□□ -0.15
PF4V1P10720 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.1□□□□□ -0.15
PF4V1P10720 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PF4V1P10720 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PF4V1P10720 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PF4V1P10720 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
PF4V1P10720 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.1□□□□□ -0.15
PF4V1P10720 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PF4V1P10720 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PF4V1P10720 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.1□□□□□ -0.15
PF4V1P10720 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.1□□□□□ -0.15
PF4V1P10720 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.1□□□□□ -0.15
PF4V1P10720 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PF4V1P10720 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PF4V1P10720 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PF4V1P10720 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.1□□□□□ -0.15
PF4V1P10720 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PF4V1P10720 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PF4V1P10720 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PF4V1P10720 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PF4V1P10720 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms