Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.82■□□□□ 0.44
CCDC162PA2VCL2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC162PA2VCL2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC162PA2VCL2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC162PA2VCL2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC162PA2VCL2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC162PA2VCL2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 AC005332.1-201ENST00000577698 1310 ntBASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 AC011270.2-201ENST00000624293 2550 ntBASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 FAM86EP-206ENST00000510506 987 ntBASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC162PA2VCL2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCDC162PA2VCL2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC162PA2VCL2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC162PA2VCL2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC162PA2VCL2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC162PA2VCL2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC162PA2VCL2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC162PA2VCL2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC162PA2VCL2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC162PA2VCL2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC162PA2VCL2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC162PA2VCL2 AC087388.1-201ENST00000571370 1112 ntBASIC17.8■□□□□ 0.44
CCDC162PA2VCL2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
CCDC162PA2VCL2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC162PA2VCL2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC162PA2VCL2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC162PA2VCL2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC162PA2VCL2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC162PA2VCL2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC162PA2VCL2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC162PA2VCL2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms