Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
HLA-DRB4X5D2U9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-DRB4X5D2U9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DRB4X5D2U9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-DRB4X5D2U9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.35■□□□□ 0.53
HLA-DRB4X5D2U9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-DRB4X5D2U9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
HLA-DRB4X5D2U9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRB4X5D2U9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRB4X5D2U9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DRB4X5D2U9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.34■□□□□ 0.53
HLA-DRB4X5D2U9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
HLA-DRB4X5D2U9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DRB4X5D2U9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
HLA-DRB4X5D2U9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DRB4X5D2U9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DRB4X5D2U9 AC126177.7-201ENST00000547904 679 ntBASIC18.33■□□□□ 0.52
HLA-DRB4X5D2U9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HLA-DRB4X5D2U9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DRB4X5D2U9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.33■□□□□ 0.52
HLA-DRB4X5D2U9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DRB4X5D2U9 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DRB4X5D2U9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DRB4X5D2U9 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DRB4X5D2U9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DRB4X5D2U9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DRB4X5D2U9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
HLA-DRB4X5D2U9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DRB4X5D2U9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DRB4X5D2U9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DRB4X5D2U9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DRB4X5D2U9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DRB4X5D2U9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DRB4X5D2U9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DRB4X5D2U9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DRB4X5D2U9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DRB4X5D2U9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DRB4X5D2U9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DRB4X5D2U9 AP004609.3-201ENST00000610705 1884 ntBASIC18.31■□□□□ 0.52
HLA-DRB4X5D2U9 AL359258.2-201ENST00000564063 1566 ntBASIC18.3■□□□□ 0.52
HLA-DRB4X5D2U9 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DRB4X5D2U9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.3■□□□□ 0.52
HLA-DRB4X5D2U9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.3■□□□□ 0.52
HLA-DRB4X5D2U9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DRB4X5D2U9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.3■□□□□ 0.52
HLA-DRB4X5D2U9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DRB4X5D2U9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HLA-DRB4X5D2U9 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HLA-DRB4X5D2U9 AC142472.1-201ENST00000612013 1741 ntBASIC18.29■□□□□ 0.52
HLA-DRB4X5D2U9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DRB4X5D2U9 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.29■□□□□ 0.52
HLA-DRB4X5D2U9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DRB4X5D2U9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-DRB4X5D2U9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DRB4X5D2U9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DRB4X5D2U9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DRB4X5D2U9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DRB4X5D2U9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.28■□□□□ 0.52
HLA-DRB4X5D2U9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DRB4X5D2U9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DRB4X5D2U9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-DRB4X5D2U9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.28■□□□□ 0.52
HLA-DRB4X5D2U9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DRB4X5D2U9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DRB4X5D2U9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DRB4X5D2U9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.27■□□□□ 0.52
HLA-DRB4X5D2U9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.27■□□□□ 0.52
HLA-DRB4X5D2U9 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.27■□□□□ 0.52
HLA-DRB4X5D2U9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DRB4X5D2U9 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.27■□□□□ 0.52
HLA-DRB4X5D2U9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HLA-DRB4X5D2U9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DRB4X5D2U9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HLA-DRB4X5D2U9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DRB4X5D2U9 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HLA-DRB4X5D2U9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DRB4X5D2U9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DRB4X5D2U9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DRB4X5D2U9 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DRB4X5D2U9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HLA-DRB4X5D2U9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.24■□□□□ 0.51
HLA-DRB4X5D2U9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.24■□□□□ 0.51
HLA-DRB4X5D2U9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DRB4X5D2U9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.24■□□□□ 0.51
HLA-DRB4X5D2U9 MIR4449-201ENST00000578365 66 ntBASIC18.24■□□□□ 0.51
HLA-DRB4X5D2U9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DRB4X5D2U9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DRB4X5D2U9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRB4X5D2U9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRB4X5D2U9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRB4X5D2U9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRB4X5D2U9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DRB4X5D2U9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.23■□□□□ 0.51
HLA-DRB4X5D2U9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
HLA-DRB4X5D2U9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DRB4X5D2U9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DRB4X5D2U9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HLA-DRB4X5D2U9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.22■□□□□ 0.51
HLA-DRB4X5D2U9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HLA-DRB4X5D2U9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms