Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
PCDHA9Q9Y5H5 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHA9Q9Y5H5 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHA9Q9Y5H5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
PCDHA9Q9Y5H5 MIR7108-201ENST00000614319 87 ntBASIC23.6■■□□□ 1.37
PCDHA9Q9Y5H5 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDHA9Q9Y5H5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.6■■□□□ 1.37
PCDHA9Q9Y5H5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
PCDHA9Q9Y5H5 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHA9Q9Y5H5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHA9Q9Y5H5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHA9Q9Y5H5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHA9Q9Y5H5 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.58■■□□□ 1.37
PCDHA9Q9Y5H5 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
PCDHA9Q9Y5H5 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHA9Q9Y5H5 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PCDHA9Q9Y5H5 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.58■■□□□ 1.36
PCDHA9Q9Y5H5 AP004609.3-201ENST00000610705 1884 ntBASIC23.58■■□□□ 1.36
PCDHA9Q9Y5H5 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHA9Q9Y5H5 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.57■■□□□ 1.36
PCDHA9Q9Y5H5 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHA9Q9Y5H5 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHA9Q9Y5H5 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHA9Q9Y5H5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
PCDHA9Q9Y5H5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHA9Q9Y5H5 AC148477.6-201ENST00000623746 465 ntBASIC23.56■■□□□ 1.36
PCDHA9Q9Y5H5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDHA9Q9Y5H5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
PCDHA9Q9Y5H5 HLA-V-202ENST00000446817 847 ntBASIC23.55■■□□□ 1.36
PCDHA9Q9Y5H5 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHA9Q9Y5H5 AC016575.1-201ENST00000607026 382 ntBASIC23.54■■□□□ 1.36
PCDHA9Q9Y5H5 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA9Q9Y5H5 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA9Q9Y5H5 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA9Q9Y5H5 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHA9Q9Y5H5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
PCDHA9Q9Y5H5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA9Q9Y5H5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.52■■□□□ 1.36
PCDHA9Q9Y5H5 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PCDHA9Q9Y5H5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.52■■□□□ 1.36
PCDHA9Q9Y5H5 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.52■■□□□ 1.36
PCDHA9Q9Y5H5 MIR219A2-201ENST00000608502 1504 ntBASIC23.52■■□□□ 1.36
PCDHA9Q9Y5H5 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
PCDHA9Q9Y5H5 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA9Q9Y5H5 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
PCDHA9Q9Y5H5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
PCDHA9Q9Y5H5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHA9Q9Y5H5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
PCDHA9Q9Y5H5 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHA9Q9Y5H5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHA9Q9Y5H5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHA9Q9Y5H5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDHA9Q9Y5H5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHA9Q9Y5H5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHA9Q9Y5H5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
PCDHA9Q9Y5H5 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHA9Q9Y5H5 WHAMMP3-201ENST00000611636 1609 ntBASIC23.5■■□□□ 1.35
PCDHA9Q9Y5H5 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHA9Q9Y5H5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDHA9Q9Y5H5 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDHA9Q9Y5H5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDHA9Q9Y5H5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.49■■□□□ 1.35
PCDHA9Q9Y5H5 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
PCDHA9Q9Y5H5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHA9Q9Y5H5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHA9Q9Y5H5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHA9Q9Y5H5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHA9Q9Y5H5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHA9Q9Y5H5 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHA9Q9Y5H5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDHA9Q9Y5H5 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
PCDHA9Q9Y5H5 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDHA9Q9Y5H5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHA9Q9Y5H5 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHA9Q9Y5H5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHA9Q9Y5H5 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHA9Q9Y5H5 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
PCDHA9Q9Y5H5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHA9Q9Y5H5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHA9Q9Y5H5 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHA9Q9Y5H5 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
PCDHA9Q9Y5H5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHA9Q9Y5H5 AC093323.1-202ENST00000635031 2045 ntBASIC23.46■■□□□ 1.35
PCDHA9Q9Y5H5 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
PCDHA9Q9Y5H5 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHA9Q9Y5H5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHA9Q9Y5H5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.45■■□□□ 1.34
PCDHA9Q9Y5H5 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.45■■□□□ 1.34
PCDHA9Q9Y5H5 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHA9Q9Y5H5 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHA9Q9Y5H5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHA9Q9Y5H5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.44■■□□□ 1.34
PCDHA9Q9Y5H5 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHA9Q9Y5H5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.44■■□□□ 1.34
PCDHA9Q9Y5H5 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.44■■□□□ 1.34
PCDHA9Q9Y5H5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHA9Q9Y5H5 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHA9Q9Y5H5 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHA9Q9Y5H5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.43■■□□□ 1.34
PCDHA9Q9Y5H5 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms