Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00588Q9Y4M8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LINC00588Q9Y4M8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00588Q9Y4M8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC16.91■□□□□ 0.3
LINC00588Q9Y4M8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC16.91■□□□□ 0.3
LINC00588Q9Y4M8 TSPY13P-201ENST00000338964 914 ntBASIC16.91■□□□□ 0.3
LINC00588Q9Y4M8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00588Q9Y4M8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LINC00588Q9Y4M8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LINC00588Q9Y4M8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LINC00588Q9Y4M8 BX255925.1-201ENST00000566954 1854 ntBASIC16.9■□□□□ 0.3
LINC00588Q9Y4M8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
LINC00588Q9Y4M8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00588Q9Y4M8 AL449106.1-201ENST00000608517 1980 ntBASIC16.9■□□□□ 0.3
LINC00588Q9Y4M8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00588Q9Y4M8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00588Q9Y4M8 ATP5G2P3-201ENST00000429083 425 ntBASIC16.9■□□□□ 0.3
LINC00588Q9Y4M8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LINC00588Q9Y4M8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00588Q9Y4M8 AC142086.6-201ENST00000621154 1765 ntBASIC16.89■□□□□ 0.3
LINC00588Q9Y4M8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00588Q9Y4M8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00588Q9Y4M8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
LINC00588Q9Y4M8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LINC00588Q9Y4M8 AC129492.7-201ENST00000622992 756 ntBASIC16.89■□□□□ 0.29
LINC00588Q9Y4M8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00588Q9Y4M8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00588Q9Y4M8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
LINC00588Q9Y4M8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC00588Q9Y4M8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC16.88■□□□□ 0.29
LINC00588Q9Y4M8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LINC00588Q9Y4M8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC00588Q9Y4M8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LINC00588Q9Y4M8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LINC00588Q9Y4M8 RAP2CP1-202ENST00000605179 643 ntBASIC16.88■□□□□ 0.29
LINC00588Q9Y4M8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00588Q9Y4M8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.87■□□□□ 0.29
LINC00588Q9Y4M8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LINC00588Q9Y4M8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC16.87■□□□□ 0.29
LINC00588Q9Y4M8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00588Q9Y4M8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC16.87■□□□□ 0.29
LINC00588Q9Y4M8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC16.87■□□□□ 0.29
LINC00588Q9Y4M8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LINC00588Q9Y4M8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
LINC00588Q9Y4M8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00588Q9Y4M8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
LINC00588Q9Y4M8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00588Q9Y4M8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00588Q9Y4M8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00588Q9Y4M8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.86■□□□□ 0.29
LINC00588Q9Y4M8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00588Q9Y4M8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC00588Q9Y4M8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00588Q9Y4M8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LINC00588Q9Y4M8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00588Q9Y4M8 DUX4L18-201ENST00000553347 1267 ntBASIC16.85■□□□□ 0.29
LINC00588Q9Y4M8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00588Q9Y4M8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
LINC00588Q9Y4M8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC00588Q9Y4M8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
LINC00588Q9Y4M8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
LINC00588Q9Y4M8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.85■□□□□ 0.29
LINC00588Q9Y4M8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC00588Q9Y4M8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00588Q9Y4M8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00588Q9Y4M8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00588Q9Y4M8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00588Q9Y4M8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00588Q9Y4M8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00588Q9Y4M8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.83■□□□□ 0.28
LINC00588Q9Y4M8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.83■□□□□ 0.28
LINC00588Q9Y4M8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
LINC00588Q9Y4M8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.82■□□□□ 0.28
LINC00588Q9Y4M8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LINC00588Q9Y4M8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00588Q9Y4M8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LINC00588Q9Y4M8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00588Q9Y4M8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00588Q9Y4M8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LINC00588Q9Y4M8 DUX4L9-201ENST00000449051 1259 ntBASIC16.81■□□□□ 0.28
LINC00588Q9Y4M8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00588Q9Y4M8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.81■□□□□ 0.28
LINC00588Q9Y4M8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LINC00588Q9Y4M8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.81■□□□□ 0.28
LINC00588Q9Y4M8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LINC00588Q9Y4M8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00588Q9Y4M8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00588Q9Y4M8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00588Q9Y4M8 SPCS2P3-201ENST00000500401 656 ntBASIC16.8■□□□□ 0.28
LINC00588Q9Y4M8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00588Q9Y4M8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00588Q9Y4M8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LINC00588Q9Y4M8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00588Q9Y4M8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
LINC00588Q9Y4M8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00588Q9Y4M8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00588Q9Y4M8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00588Q9Y4M8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00588Q9Y4M8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00588Q9Y4M8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms