Protein–RNA interactions for Protein: Q9UQP3

TNN, Tenascin-N, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNQ9UQP3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TNNQ9UQP3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.41■■■□□ 2.62
TNNQ9UQP3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.41■■■□□ 2.62
TNNQ9UQP3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TNNQ9UQP3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.39■■■□□ 2.62
TNNQ9UQP3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TNNQ9UQP3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TNNQ9UQP3 AC091060.1-201ENST00000623524 1766 ntBASIC31.38■■■□□ 2.61
TNNQ9UQP3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.38■■■□□ 2.61
TNNQ9UQP3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
TNNQ9UQP3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
TNNQ9UQP3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC31.36■■■□□ 2.61
TNNQ9UQP3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.36■■■□□ 2.61
TNNQ9UQP3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TNNQ9UQP3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
TNNQ9UQP3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
TNNQ9UQP3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
TNNQ9UQP3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
TNNQ9UQP3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
TNNQ9UQP3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
TNNQ9UQP3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
TNNQ9UQP3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
TNNQ9UQP3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
TNNQ9UQP3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
TNNQ9UQP3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
TNNQ9UQP3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC31.35■■■□□ 2.61
TNNQ9UQP3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TNNQ9UQP3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.35■■■□□ 2.61
TNNQ9UQP3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.35■■■□□ 2.61
TNNQ9UQP3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TNNQ9UQP3 AL359504.2-201ENST00000605506 1601 ntBASIC31.35■■■□□ 2.61
TNNQ9UQP3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
TNNQ9UQP3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
TNNQ9UQP3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31.34■■■□□ 2.61
TNNQ9UQP3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TNNQ9UQP3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
TNNQ9UQP3 MIR4449-201ENST00000578365 66 ntBASIC31.33■■■□□ 2.61
TNNQ9UQP3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
TNNQ9UQP3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TNNQ9UQP3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TNNQ9UQP3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TNNQ9UQP3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC31.32■■■□□ 2.61
TNNQ9UQP3 AL157400.5-201ENST00000507624 621 ntBASIC31.32■■■□□ 2.6
TNNQ9UQP3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
TNNQ9UQP3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TNNQ9UQP3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC31.31■■■□□ 2.6
TNNQ9UQP3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TNNQ9UQP3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TNNQ9UQP3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC31.31■■■□□ 2.6
TNNQ9UQP3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TNNQ9UQP3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.31■■■□□ 2.6
TNNQ9UQP3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
TNNQ9UQP3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
TNNQ9UQP3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC31.3■■■□□ 2.6
TNNQ9UQP3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TNNQ9UQP3 AC060814.1-201ENST00000554326 538 ntBASIC31.3■■■□□ 2.6
TNNQ9UQP3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.3■■■□□ 2.6
TNNQ9UQP3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
TNNQ9UQP3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC31.29■■■□□ 2.6
TNNQ9UQP3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
TNNQ9UQP3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TNNQ9UQP3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
TNNQ9UQP3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.28■■■□□ 2.6
TNNQ9UQP3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.28■■■□□ 2.6
TNNQ9UQP3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
TNNQ9UQP3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.27■■■□□ 2.6
TNNQ9UQP3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC31.26■■■□□ 2.6
TNNQ9UQP3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
TNNQ9UQP3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC31.26■■■□□ 2.59
TNNQ9UQP3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
TNNQ9UQP3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TNNQ9UQP3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TNNQ9UQP3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
TNNQ9UQP3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TNNQ9UQP3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TNNQ9UQP3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
TNNQ9UQP3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
TNNQ9UQP3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TNNQ9UQP3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.22■■■□□ 2.59
TNNQ9UQP3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.22■■■□□ 2.59
TNNQ9UQP3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.22■■■□□ 2.59
TNNQ9UQP3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.21■■■□□ 2.59
TNNQ9UQP3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.21■■■□□ 2.59
TNNQ9UQP3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
TNNQ9UQP3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
TNNQ9UQP3 ERN1-208ENST00000606895 2068 ntBASIC31.2■■■□□ 2.59
TNNQ9UQP3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
TNNQ9UQP3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
TNNQ9UQP3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
TNNQ9UQP3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.2■■■□□ 2.58
TNNQ9UQP3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC31.2■■■□□ 2.58
TNNQ9UQP3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
TNNQ9UQP3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
TNNQ9UQP3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
TNNQ9UQP3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC31.19■■■□□ 2.58
TNNQ9UQP3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC31.19■■■□□ 2.58
TNNQ9UQP3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC31.18■■■□□ 2.58
TNNQ9UQP3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
TNNQ9UQP3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TNNQ9UQP3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms