Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDHGB4Q9UN71 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGB4Q9UN71 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDHGB4Q9UN71 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
PCDHGB4Q9UN71 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
PCDHGB4Q9UN71 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGB4Q9UN71 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGB4Q9UN71 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGB4Q9UN71 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGB4Q9UN71 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHGB4Q9UN71 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHGB4Q9UN71 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGB4Q9UN71 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHGB4Q9UN71 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGB4Q9UN71 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.5■■□□□ 1.35
PCDHGB4Q9UN71 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
PCDHGB4Q9UN71 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGB4Q9UN71 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.49■■□□□ 1.35
PCDHGB4Q9UN71 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGB4Q9UN71 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.49■■□□□ 1.35
PCDHGB4Q9UN71 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGB4Q9UN71 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
PCDHGB4Q9UN71 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGB4Q9UN71 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGB4Q9UN71 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.47■■□□□ 1.35
PCDHGB4Q9UN71 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGB4Q9UN71 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGB4Q9UN71 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.47■■□□□ 1.35
PCDHGB4Q9UN71 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGB4Q9UN71 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
PCDHGB4Q9UN71 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGB4Q9UN71 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGB4Q9UN71 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.47■■□□□ 1.35
PCDHGB4Q9UN71 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGB4Q9UN71 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGB4Q9UN71 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
PCDHGB4Q9UN71 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.46■■□□□ 1.35
PCDHGB4Q9UN71 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.45■■□□□ 1.35
PCDHGB4Q9UN71 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
PCDHGB4Q9UN71 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.45■■□□□ 1.35
PCDHGB4Q9UN71 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
PCDHGB4Q9UN71 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGB4Q9UN71 AP004609.3-201ENST00000610705 1884 ntBASIC23.45■■□□□ 1.34
PCDHGB4Q9UN71 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGB4Q9UN71 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.44■■□□□ 1.34
PCDHGB4Q9UN71 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGB4Q9UN71 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGB4Q9UN71 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGB4Q9UN71 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGB4Q9UN71 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.43■■□□□ 1.34
PCDHGB4Q9UN71 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
PCDHGB4Q9UN71 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGB4Q9UN71 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.43■■□□□ 1.34
PCDHGB4Q9UN71 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.43■■□□□ 1.34
PCDHGB4Q9UN71 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.43■■□□□ 1.34
PCDHGB4Q9UN71 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGB4Q9UN71 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGB4Q9UN71 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGB4Q9UN71 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGB4Q9UN71 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.42■■□□□ 1.34
PCDHGB4Q9UN71 RPS2P35-201ENST00000443417 897 ntBASIC23.42■■□□□ 1.34
PCDHGB4Q9UN71 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.42■■□□□ 1.34
PCDHGB4Q9UN71 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.42■■□□□ 1.34
PCDHGB4Q9UN71 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.42■■□□□ 1.34
PCDHGB4Q9UN71 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.42■■□□□ 1.34
PCDHGB4Q9UN71 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGB4Q9UN71 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGB4Q9UN71 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGB4Q9UN71 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.41■■□□□ 1.34
PCDHGB4Q9UN71 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGB4Q9UN71 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGB4Q9UN71 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGB4Q9UN71 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.41■■□□□ 1.34
PCDHGB4Q9UN71 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGB4Q9UN71 WHAMMP3-201ENST00000611636 1609 ntBASIC23.41■■□□□ 1.34
PCDHGB4Q9UN71 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
PCDHGB4Q9UN71 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGB4Q9UN71 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGB4Q9UN71 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
PCDHGB4Q9UN71 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PCDHGB4Q9UN71 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PCDHGB4Q9UN71 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PCDHGB4Q9UN71 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGB4Q9UN71 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGB4Q9UN71 LINC01971-201ENST00000617888 1048 ntBASIC23.39■■□□□ 1.33
PCDHGB4Q9UN71 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.39■■□□□ 1.33
PCDHGB4Q9UN71 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGB4Q9UN71 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGB4Q9UN71 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGB4Q9UN71 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.39■■□□□ 1.33
PCDHGB4Q9UN71 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.39■■□□□ 1.33
PCDHGB4Q9UN71 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGB4Q9UN71 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGB4Q9UN71 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
PCDHGB4Q9UN71 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDHGB4Q9UN71 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGB4Q9UN71 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGB4Q9UN71 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGB4Q9UN71 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGB4Q9UN71 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms