Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
C12orf4Q9NQ89 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
C12orf4Q9NQ89 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
C12orf4Q9NQ89 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.01■□□□□ 0.95
C12orf4Q9NQ89 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
C12orf4Q9NQ89 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.01■□□□□ 0.95
C12orf4Q9NQ89 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
C12orf4Q9NQ89 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21■□□□□ 0.95
C12orf4Q9NQ89 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21■□□□□ 0.95
C12orf4Q9NQ89 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21■□□□□ 0.95
C12orf4Q9NQ89 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21■□□□□ 0.95
C12orf4Q9NQ89 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
C12orf4Q9NQ89 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21■□□□□ 0.95
C12orf4Q9NQ89 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21■□□□□ 0.95
C12orf4Q9NQ89 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21■□□□□ 0.95
C12orf4Q9NQ89 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
C12orf4Q9NQ89 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C12orf4Q9NQ89 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.99■□□□□ 0.95
C12orf4Q9NQ89 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
C12orf4Q9NQ89 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.98■□□□□ 0.95
C12orf4Q9NQ89 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
C12orf4Q9NQ89 AC091060.1-201ENST00000623524 1766 ntBASIC20.98■□□□□ 0.95
C12orf4Q9NQ89 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.98■□□□□ 0.95
C12orf4Q9NQ89 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
C12orf4Q9NQ89 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
C12orf4Q9NQ89 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
C12orf4Q9NQ89 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.97■□□□□ 0.95
C12orf4Q9NQ89 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.97■□□□□ 0.95
C12orf4Q9NQ89 AP006261.1-201ENST00000584783 668 ntBASIC20.97■□□□□ 0.95
C12orf4Q9NQ89 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.97■□□□□ 0.95
C12orf4Q9NQ89 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
C12orf4Q9NQ89 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
C12orf4Q9NQ89 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C12orf4Q9NQ89 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C12orf4Q9NQ89 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.95■□□□□ 0.94
C12orf4Q9NQ89 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.95■□□□□ 0.94
C12orf4Q9NQ89 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
C12orf4Q9NQ89 AC133561.1-201ENST00000568600 2415 ntBASIC20.94■□□□□ 0.94
C12orf4Q9NQ89 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.94■□□□□ 0.94
C12orf4Q9NQ89 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
C12orf4Q9NQ89 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
C12orf4Q9NQ89 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
C12orf4Q9NQ89 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.93■□□□□ 0.94
C12orf4Q9NQ89 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
C12orf4Q9NQ89 AC145676.1-201ENST00000514988 2004 ntBASIC20.93■□□□□ 0.94
C12orf4Q9NQ89 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.93■□□□□ 0.94
C12orf4Q9NQ89 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
C12orf4Q9NQ89 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
C12orf4Q9NQ89 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
C12orf4Q9NQ89 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
C12orf4Q9NQ89 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
C12orf4Q9NQ89 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
C12orf4Q9NQ89 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
C12orf4Q9NQ89 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
C12orf4Q9NQ89 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
C12orf4Q9NQ89 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
C12orf4Q9NQ89 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
C12orf4Q9NQ89 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.91■□□□□ 0.94
C12orf4Q9NQ89 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
C12orf4Q9NQ89 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
C12orf4Q9NQ89 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.91■□□□□ 0.94
C12orf4Q9NQ89 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.91■□□□□ 0.94
C12orf4Q9NQ89 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
C12orf4Q9NQ89 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
C12orf4Q9NQ89 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C12orf4Q9NQ89 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C12orf4Q9NQ89 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.89■□□□□ 0.94
C12orf4Q9NQ89 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
C12orf4Q9NQ89 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
C12orf4Q9NQ89 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
C12orf4Q9NQ89 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
C12orf4Q9NQ89 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C12orf4Q9NQ89 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.89■□□□□ 0.93
C12orf4Q9NQ89 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
C12orf4Q9NQ89 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
C12orf4Q9NQ89 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
C12orf4Q9NQ89 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
C12orf4Q9NQ89 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.88■□□□□ 0.93
C12orf4Q9NQ89 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
C12orf4Q9NQ89 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.87■□□□□ 0.93
C12orf4Q9NQ89 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C12orf4Q9NQ89 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C12orf4Q9NQ89 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
C12orf4Q9NQ89 AP004609.3-201ENST00000610705 1884 ntBASIC20.87■□□□□ 0.93
C12orf4Q9NQ89 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
C12orf4Q9NQ89 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.87■□□□□ 0.93
C12orf4Q9NQ89 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C12orf4Q9NQ89 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C12orf4Q9NQ89 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C12orf4Q9NQ89 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
C12orf4Q9NQ89 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.86■□□□□ 0.93
C12orf4Q9NQ89 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.86■□□□□ 0.93
C12orf4Q9NQ89 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf4Q9NQ89 AC087741.3-201ENST00000624270 1347 ntBASIC20.85■□□□□ 0.93
C12orf4Q9NQ89 AC110285.7-201ENST00000624417 1536 ntBASIC20.85■□□□□ 0.93
C12orf4Q9NQ89 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.85■□□□□ 0.93
C12orf4Q9NQ89 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf4Q9NQ89 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
C12orf4Q9NQ89 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.85■□□□□ 0.93
C12orf4Q9NQ89 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms