Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HES4Q9HCC6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.72■□□□□ 0.91
HES4Q9HCC6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
HES4Q9HCC6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.72■□□□□ 0.91
HES4Q9HCC6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HES4Q9HCC6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HES4Q9HCC6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HES4Q9HCC6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.71■□□□□ 0.91
HES4Q9HCC6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HES4Q9HCC6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
HES4Q9HCC6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.7■□□□□ 0.9
HES4Q9HCC6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.7■□□□□ 0.9
HES4Q9HCC6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.7■□□□□ 0.9
HES4Q9HCC6 AC126177.7-201ENST00000547904 679 ntBASIC20.7■□□□□ 0.9
HES4Q9HCC6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.7■□□□□ 0.9
HES4Q9HCC6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HES4Q9HCC6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HES4Q9HCC6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.69■□□□□ 0.9
HES4Q9HCC6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HES4Q9HCC6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.69■□□□□ 0.9
HES4Q9HCC6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.69■□□□□ 0.9
HES4Q9HCC6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HES4Q9HCC6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HES4Q9HCC6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HES4Q9HCC6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HES4Q9HCC6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HES4Q9HCC6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HES4Q9HCC6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HES4Q9HCC6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HES4Q9HCC6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HES4Q9HCC6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HES4Q9HCC6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
HES4Q9HCC6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
HES4Q9HCC6 AC091060.1-201ENST00000623524 1766 ntBASIC20.67■□□□□ 0.9
HES4Q9HCC6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
HES4Q9HCC6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HES4Q9HCC6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HES4Q9HCC6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HES4Q9HCC6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HES4Q9HCC6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.66■□□□□ 0.9
HES4Q9HCC6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HES4Q9HCC6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HES4Q9HCC6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HES4Q9HCC6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HES4Q9HCC6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HES4Q9HCC6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HES4Q9HCC6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.66■□□□□ 0.9
HES4Q9HCC6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HES4Q9HCC6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HES4Q9HCC6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HES4Q9HCC6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HES4Q9HCC6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HES4Q9HCC6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.65■□□□□ 0.9
HES4Q9HCC6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.65■□□□□ 0.9
HES4Q9HCC6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HES4Q9HCC6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HES4Q9HCC6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HES4Q9HCC6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HES4Q9HCC6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HES4Q9HCC6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
HES4Q9HCC6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HES4Q9HCC6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HES4Q9HCC6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HES4Q9HCC6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HES4Q9HCC6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HES4Q9HCC6 AL359504.2-201ENST00000605506 1601 ntBASIC20.64■□□□□ 0.89
HES4Q9HCC6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HES4Q9HCC6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HES4Q9HCC6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.63■□□□□ 0.89
HES4Q9HCC6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HES4Q9HCC6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HES4Q9HCC6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HES4Q9HCC6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HES4Q9HCC6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.62■□□□□ 0.89
HES4Q9HCC6 AC092803.2-201ENST00000564287 1899 ntBASIC20.61■□□□□ 0.89
HES4Q9HCC6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HES4Q9HCC6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HES4Q9HCC6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HES4Q9HCC6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HES4Q9HCC6 AC145676.1-201ENST00000514988 2004 ntBASIC20.6■□□□□ 0.89
HES4Q9HCC6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HES4Q9HCC6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HES4Q9HCC6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.6■□□□□ 0.89
HES4Q9HCC6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HES4Q9HCC6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HES4Q9HCC6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HES4Q9HCC6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HES4Q9HCC6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HES4Q9HCC6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.59■□□□□ 0.89
HES4Q9HCC6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.59■□□□□ 0.89
HES4Q9HCC6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HES4Q9HCC6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.59■□□□□ 0.89
HES4Q9HCC6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.59■□□□□ 0.89
HES4Q9HCC6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HES4Q9HCC6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
HES4Q9HCC6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.58■□□□□ 0.89
HES4Q9HCC6 AC060814.1-201ENST00000554326 538 ntBASIC20.58■□□□□ 0.89
HES4Q9HCC6 MIR4449-201ENST00000578365 66 ntBASIC20.58■□□□□ 0.89
HES4Q9HCC6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HES4Q9HCC6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms