Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
POLR2J3Q9H1A7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.55■■□□□ 1.2
POLR2J3Q9H1A7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
POLR2J3Q9H1A7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
POLR2J3Q9H1A7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
POLR2J3Q9H1A7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
POLR2J3Q9H1A7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
POLR2J3Q9H1A7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
POLR2J3Q9H1A7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
POLR2J3Q9H1A7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
POLR2J3Q9H1A7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.52■■□□□ 1.2
POLR2J3Q9H1A7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
POLR2J3Q9H1A7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
POLR2J3Q9H1A7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
POLR2J3Q9H1A7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
POLR2J3Q9H1A7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
POLR2J3Q9H1A7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.2
POLR2J3Q9H1A7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
POLR2J3Q9H1A7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
POLR2J3Q9H1A7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.52■■□□□ 1.19
POLR2J3Q9H1A7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
POLR2J3Q9H1A7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
POLR2J3Q9H1A7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.51■■□□□ 1.19
POLR2J3Q9H1A7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
POLR2J3Q9H1A7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
POLR2J3Q9H1A7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
POLR2J3Q9H1A7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
POLR2J3Q9H1A7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
POLR2J3Q9H1A7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
POLR2J3Q9H1A7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
POLR2J3Q9H1A7 RPS2P35-201ENST00000443417 897 ntBASIC22.5■■□□□ 1.19
POLR2J3Q9H1A7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
POLR2J3Q9H1A7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.5■■□□□ 1.19
POLR2J3Q9H1A7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
POLR2J3Q9H1A7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.49■■□□□ 1.19
POLR2J3Q9H1A7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
POLR2J3Q9H1A7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
POLR2J3Q9H1A7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
POLR2J3Q9H1A7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
POLR2J3Q9H1A7 AC148477.6-201ENST00000623746 465 ntBASIC22.49■■□□□ 1.19
POLR2J3Q9H1A7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
POLR2J3Q9H1A7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
POLR2J3Q9H1A7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
POLR2J3Q9H1A7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR2J3Q9H1A7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR2J3Q9H1A7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR2J3Q9H1A7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.48■■□□□ 1.19
POLR2J3Q9H1A7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR2J3Q9H1A7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR2J3Q9H1A7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.48■■□□□ 1.19
POLR2J3Q9H1A7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
POLR2J3Q9H1A7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.46■■□□□ 1.19
POLR2J3Q9H1A7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.46■■□□□ 1.19
POLR2J3Q9H1A7 DUX4L11-201ENST00000611504 1267 ntBASIC22.46■■□□□ 1.19
POLR2J3Q9H1A7 DUX4L12-201ENST00000614593 1267 ntBASIC22.46■■□□□ 1.19
POLR2J3Q9H1A7 DUX4L14-201ENST00000621227 1267 ntBASIC22.46■■□□□ 1.19
POLR2J3Q9H1A7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
POLR2J3Q9H1A7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
POLR2J3Q9H1A7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
POLR2J3Q9H1A7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
POLR2J3Q9H1A7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.45■■□□□ 1.18
POLR2J3Q9H1A7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.45■■□□□ 1.18
POLR2J3Q9H1A7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
POLR2J3Q9H1A7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
POLR2J3Q9H1A7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.44■■□□□ 1.18
POLR2J3Q9H1A7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.44■■□□□ 1.18
POLR2J3Q9H1A7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
POLR2J3Q9H1A7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
POLR2J3Q9H1A7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
POLR2J3Q9H1A7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
POLR2J3Q9H1A7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
POLR2J3Q9H1A7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.43■■□□□ 1.18
POLR2J3Q9H1A7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
POLR2J3Q9H1A7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.42■■□□□ 1.18
POLR2J3Q9H1A7 MIR219A2-201ENST00000608502 1504 ntBASIC22.42■■□□□ 1.18
POLR2J3Q9H1A7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
POLR2J3Q9H1A7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms