Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 YBX1P4-201ENST00000392794 808 ntBASIC13□□□□□ -0.33
KRTAP4-1Q9BYQ7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC13□□□□□ -0.33
KRTAP4-1Q9BYQ7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC13□□□□□ -0.33
KRTAP4-1Q9BYQ7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC13□□□□□ -0.33
KRTAP4-1Q9BYQ7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC12.99□□□□□ -0.33
KRTAP4-1Q9BYQ7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
KRTAP4-1Q9BYQ7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
KRTAP4-1Q9BYQ7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
KRTAP4-1Q9BYQ7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC12.99□□□□□ -0.33
KRTAP4-1Q9BYQ7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC12.99□□□□□ -0.33
KRTAP4-1Q9BYQ7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
KRTAP4-1Q9BYQ7 MIR4508-201ENST00000584178 70 ntBASIC12.99□□□□□ -0.33
KRTAP4-1Q9BYQ7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC12.99□□□□□ -0.33
KRTAP4-1Q9BYQ7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
KRTAP4-1Q9BYQ7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KRTAP4-1Q9BYQ7 AC019069.1-201ENST00000610008 1333 ntBASIC12.98□□□□□ -0.33
KRTAP4-1Q9BYQ7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC12.98□□□□□ -0.33
KRTAP4-1Q9BYQ7 AC018755.3-202ENST00000596210 929 ntBASIC12.98□□□□□ -0.33
KRTAP4-1Q9BYQ7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
KRTAP4-1Q9BYQ7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC12.97□□□□□ -0.33
KRTAP4-1Q9BYQ7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
KRTAP4-1Q9BYQ7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
KRTAP4-1Q9BYQ7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC12.97□□□□□ -0.33
KRTAP4-1Q9BYQ7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KRTAP4-1Q9BYQ7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KRTAP4-1Q9BYQ7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC12.97□□□□□ -0.33
KRTAP4-1Q9BYQ7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KRTAP4-1Q9BYQ7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
KRTAP4-1Q9BYQ7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
KRTAP4-1Q9BYQ7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
KRTAP4-1Q9BYQ7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC12.96□□□□□ -0.33
KRTAP4-1Q9BYQ7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
KRTAP4-1Q9BYQ7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC12.96□□□□□ -0.33
KRTAP4-1Q9BYQ7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
KRTAP4-1Q9BYQ7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
KRTAP4-1Q9BYQ7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
KRTAP4-1Q9BYQ7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC12.95□□□□□ -0.34
KRTAP4-1Q9BYQ7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC12.95□□□□□ -0.34
KRTAP4-1Q9BYQ7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC12.95□□□□□ -0.34
KRTAP4-1Q9BYQ7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
KRTAP4-1Q9BYQ7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KRTAP4-1Q9BYQ7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
KRTAP4-1Q9BYQ7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
KRTAP4-1Q9BYQ7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC12.95□□□□□ -0.34
KRTAP4-1Q9BYQ7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
KRTAP4-1Q9BYQ7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KRTAP4-1Q9BYQ7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
KRTAP4-1Q9BYQ7 AL356441.2-201ENST00000443009 864 ntBASIC12.94□□□□□ -0.34
KRTAP4-1Q9BYQ7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KRTAP4-1Q9BYQ7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
KRTAP4-1Q9BYQ7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
KRTAP4-1Q9BYQ7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KRTAP4-1Q9BYQ7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KRTAP4-1Q9BYQ7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KRTAP4-1Q9BYQ7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
KRTAP4-1Q9BYQ7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
KRTAP4-1Q9BYQ7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KRTAP4-1Q9BYQ7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KRTAP4-1Q9BYQ7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
KRTAP4-1Q9BYQ7 HYI-210ENST00000486909 905 ntTSL 5 BASIC12.93□□□□□ -0.34
KRTAP4-1Q9BYQ7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC12.93□□□□□ -0.34
KRTAP4-1Q9BYQ7 AL031848.2-201ENST00000607670 837 ntBASIC12.93□□□□□ -0.34
KRTAP4-1Q9BYQ7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC12.93□□□□□ -0.34
KRTAP4-1Q9BYQ7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KRTAP4-1Q9BYQ7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KRTAP4-1Q9BYQ7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
KRTAP4-1Q9BYQ7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC12.92□□□□□ -0.34
KRTAP4-1Q9BYQ7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC12.92□□□□□ -0.34
KRTAP4-1Q9BYQ7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
KRTAP4-1Q9BYQ7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KRTAP4-1Q9BYQ7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC12.92□□□□□ -0.34
KRTAP4-1Q9BYQ7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC12.92□□□□□ -0.34
KRTAP4-1Q9BYQ7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC12.92□□□□□ -0.34
KRTAP4-1Q9BYQ7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KRTAP4-1Q9BYQ7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
KRTAP4-1Q9BYQ7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
KRTAP4-1Q9BYQ7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
KRTAP4-1Q9BYQ7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KRTAP4-1Q9BYQ7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
KRTAP4-1Q9BYQ7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
KRTAP4-1Q9BYQ7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KRTAP4-1Q9BYQ7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KRTAP4-1Q9BYQ7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
KRTAP4-1Q9BYQ7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KRTAP4-1Q9BYQ7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
KRTAP4-1Q9BYQ7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC12.91□□□□□ -0.34
KRTAP4-1Q9BYQ7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KRTAP4-1Q9BYQ7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC12.91□□□□□ -0.34
KRTAP4-1Q9BYQ7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC12.9□□□□□ -0.34
KRTAP4-1Q9BYQ7 ABCB10P1-201ENST00000614297 2181 ntBASIC12.9□□□□□ -0.34
KRTAP4-1Q9BYQ7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KRTAP4-1Q9BYQ7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
KRTAP4-1Q9BYQ7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KRTAP4-1Q9BYQ7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
KRTAP4-1Q9BYQ7 AC239859.2-201ENST00000444165 318 ntBASIC12.9□□□□□ -0.34
KRTAP4-1Q9BYQ7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC12.9□□□□□ -0.34
KRTAP4-1Q9BYQ7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC12.9□□□□□ -0.34
KRTAP4-1Q9BYQ7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
KRTAP4-1Q9BYQ7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
KRTAP4-1Q9BYQ7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms