Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC6A7Q99884 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A7Q99884 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A7Q99884 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A7Q99884 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A7Q99884 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A7Q99884 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC6A7Q99884 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC6A7Q99884 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.15■□□□□ 0.98
SLC6A7Q99884 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.15■□□□□ 0.98
SLC6A7Q99884 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC6A7Q99884 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLC6A7Q99884 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLC6A7Q99884 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
SLC6A7Q99884 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLC6A7Q99884 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SLC6A7Q99884 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC6A7Q99884 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC6A7Q99884 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC6A7Q99884 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A7Q99884 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A7Q99884 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A7Q99884 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A7Q99884 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A7Q99884 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A7Q99884 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A7Q99884 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A7Q99884 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A7Q99884 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A7Q99884 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC6A7Q99884 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A7Q99884 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A7Q99884 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC6A7Q99884 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC6A7Q99884 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A7Q99884 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC6A7Q99884 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A7Q99884 AC018358.1-201ENST00000631079 1402 ntBASIC21.12■□□□□ 0.97
SLC6A7Q99884 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.11■□□□□ 0.97
SLC6A7Q99884 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A7Q99884 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC6A7Q99884 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.11■□□□□ 0.97
SLC6A7Q99884 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC6A7Q99884 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A7Q99884 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A7Q99884 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A7Q99884 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.11■□□□□ 0.97
SLC6A7Q99884 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A7Q99884 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A7Q99884 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A7Q99884 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A7Q99884 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A7Q99884 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A7Q99884 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.11■□□□□ 0.97
SLC6A7Q99884 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SLC6A7Q99884 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.1■□□□□ 0.97
SLC6A7Q99884 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC6A7Q99884 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC6A7Q99884 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SLC6A7Q99884 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SLC6A7Q99884 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SLC6A7Q99884 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SLC6A7Q99884 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SLC6A7Q99884 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SLC6A7Q99884 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.09■□□□□ 0.97
SLC6A7Q99884 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.08■□□□□ 0.97
SLC6A7Q99884 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.08■□□□□ 0.97
SLC6A7Q99884 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.08■□□□□ 0.97
SLC6A7Q99884 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SLC6A7Q99884 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SLC6A7Q99884 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SLC6A7Q99884 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SLC6A7Q99884 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SLC6A7Q99884 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.07■□□□□ 0.96
SLC6A7Q99884 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC6A7Q99884 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC6A7Q99884 AC093323.1-202ENST00000635031 2045 ntBASIC21.07■□□□□ 0.96
SLC6A7Q99884 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC6A7Q99884 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC6A7Q99884 LINC00273-201ENST00000539813 1452 ntBASIC21.07■□□□□ 0.96
SLC6A7Q99884 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
SLC6A7Q99884 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC6A7Q99884 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC6A7Q99884 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.06■□□□□ 0.96
SLC6A7Q99884 DUSP8P4-201ENST00000399538 1761 ntBASIC21.06■□□□□ 0.96
SLC6A7Q99884 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC6A7Q99884 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.06■□□□□ 0.96
SLC6A7Q99884 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC6A7Q99884 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A7Q99884 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SLC6A7Q99884 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A7Q99884 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A7Q99884 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A7Q99884 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A7Q99884 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SLC6A7Q99884 AC092803.2-201ENST00000564287 1899 ntBASIC21.04■□□□□ 0.96
SLC6A7Q99884 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC6A7Q99884 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC6A7Q99884 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC6A7Q99884 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms