Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 AC142472.1-201ENST00000612013 1741 ntBASIC32.97■■■□□ 2.87
CFAP53Q96M91 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC32.96■■■□□ 2.87
CFAP53Q96M91 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC32.96■■■□□ 2.87
CFAP53Q96M91 RP9P-202ENST00000450133 1212 ntBASIC32.96■■■□□ 2.87
CFAP53Q96M91 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC32.96■■■□□ 2.87
CFAP53Q96M91 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
CFAP53Q96M91 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC32.95■■■□□ 2.87
CFAP53Q96M91 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC32.95■■■□□ 2.87
CFAP53Q96M91 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC32.95■■■□□ 2.87
CFAP53Q96M91 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC32.95■■■□□ 2.86
CFAP53Q96M91 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CFAP53Q96M91 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
CFAP53Q96M91 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CFAP53Q96M91 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC32.93■■■□□ 2.86
CFAP53Q96M91 AP004609.3-201ENST00000610705 1884 ntBASIC32.93■■■□□ 2.86
CFAP53Q96M91 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CFAP53Q96M91 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
CFAP53Q96M91 GFER-205ENST00000569451 517 ntTSL 5 BASIC32.93■■■□□ 2.86
CFAP53Q96M91 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC32.93■■■□□ 2.86
CFAP53Q96M91 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
CFAP53Q96M91 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC32.93■■■□□ 2.86
CFAP53Q96M91 AC093536.1-201ENST00000569153 554 ntBASIC32.91■■■□□ 2.86
CFAP53Q96M91 NTF6A-201ENST00000591175 560 ntBASIC32.91■■■□□ 2.86
CFAP53Q96M91 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC32.91■■■□□ 2.86
CFAP53Q96M91 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CFAP53Q96M91 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
CFAP53Q96M91 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CFAP53Q96M91 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CFAP53Q96M91 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC32.9■■■□□ 2.86
CFAP53Q96M91 U85056.1-201ENST00000616429 682 ntBASIC32.9■■■□□ 2.86
CFAP53Q96M91 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC32.9■■■□□ 2.86
CFAP53Q96M91 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC32.9■■■□□ 2.86
CFAP53Q96M91 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
CFAP53Q96M91 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC32.89■■■□□ 2.86
CFAP53Q96M91 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
CFAP53Q96M91 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CFAP53Q96M91 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CFAP53Q96M91 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
CFAP53Q96M91 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
CFAP53Q96M91 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
CFAP53Q96M91 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
CFAP53Q96M91 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC32.88■■■□□ 2.85
CFAP53Q96M91 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC32.87■■■□□ 2.85
CFAP53Q96M91 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC32.87■■■□□ 2.85
CFAP53Q96M91 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CFAP53Q96M91 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32.87■■■□□ 2.85
CFAP53Q96M91 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC32.87■■■□□ 2.85
CFAP53Q96M91 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC32.86■■■□□ 2.85
CFAP53Q96M91 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC32.86■■■□□ 2.85
CFAP53Q96M91 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
CFAP53Q96M91 AC026202.3-201ENST00000600805 1127 ntBASIC32.86■■■□□ 2.85
CFAP53Q96M91 AC009831.1-201ENST00000580420 1582 ntBASIC32.86■■■□□ 2.85
CFAP53Q96M91 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC32.85■■■□□ 2.85
CFAP53Q96M91 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CFAP53Q96M91 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
CFAP53Q96M91 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC32.85■■■□□ 2.85
CFAP53Q96M91 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC32.85■■■□□ 2.85
CFAP53Q96M91 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
CFAP53Q96M91 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CFAP53Q96M91 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CFAP53Q96M91 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CFAP53Q96M91 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC32.84■■■□□ 2.85
CFAP53Q96M91 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC32.84■■■□□ 2.85
CFAP53Q96M91 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CFAP53Q96M91 AC133552.2-201ENST00000619106 1032 ntBASIC32.84■■■□□ 2.85
CFAP53Q96M91 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC32.84■■■□□ 2.85
CFAP53Q96M91 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CFAP53Q96M91 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC32.83■■■□□ 2.85
CFAP53Q96M91 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CFAP53Q96M91 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CFAP53Q96M91 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC32.83■■■□□ 2.85
CFAP53Q96M91 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CFAP53Q96M91 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
CFAP53Q96M91 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC32.82■■■□□ 2.84
CFAP53Q96M91 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC32.82■■■□□ 2.84
CFAP53Q96M91 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC32.81■■■□□ 2.84
CFAP53Q96M91 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC32.81■■■□□ 2.84
CFAP53Q96M91 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
CFAP53Q96M91 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
CFAP53Q96M91 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC32.81■■■□□ 2.84
CFAP53Q96M91 HES4-204ENST00000484667 667 ntTSL 3 BASIC32.81■■■□□ 2.84
CFAP53Q96M91 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC32.81■■■□□ 2.84
CFAP53Q96M91 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC32.81■■■□□ 2.84
CFAP53Q96M91 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
CFAP53Q96M91 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CFAP53Q96M91 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CFAP53Q96M91 RAP2CP1-202ENST00000605179 643 ntBASIC32.8■■■□□ 2.84
CFAP53Q96M91 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC32.8■■■□□ 2.84
CFAP53Q96M91 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC32.79■■■□□ 2.84
CFAP53Q96M91 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC32.79■■■□□ 2.84
CFAP53Q96M91 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC32.79■■■□□ 2.84
CFAP53Q96M91 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
CFAP53Q96M91 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC32.77■■■□□ 2.84
CFAP53Q96M91 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
CFAP53Q96M91 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC32.76■■■□□ 2.84
CFAP53Q96M91 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
CFAP53Q96M91 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CFAP53Q96M91 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC32.75■■■□□ 2.83
CFAP53Q96M91 KRT18P60-201ENST00000312876 1297 ntBASIC32.75■■■□□ 2.83
CFAP53Q96M91 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC32.74■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms