Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC10.42□□□□□ -0.74
SYNE2Q8WXH0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
SYNE2Q8WXH0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SYNE2Q8WXH0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
SYNE2Q8WXH0 AC110285.7-201ENST00000624417 1536 ntBASIC10.42□□□□□ -0.74
SYNE2Q8WXH0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC10.42□□□□□ -0.74
SYNE2Q8WXH0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
SYNE2Q8WXH0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SYNE2Q8WXH0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SYNE2Q8WXH0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC10.41□□□□□ -0.74
SYNE2Q8WXH0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SYNE2Q8WXH0 AL355001.2-201ENST00000620617 1191 ntBASIC10.41□□□□□ -0.74
SYNE2Q8WXH0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
SYNE2Q8WXH0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SYNE2Q8WXH0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC10.41□□□□□ -0.74
SYNE2Q8WXH0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC10.41□□□□□ -0.74
SYNE2Q8WXH0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SYNE2Q8WXH0 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SYNE2Q8WXH0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SYNE2Q8WXH0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SYNE2Q8WXH0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SYNE2Q8WXH0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SYNE2Q8WXH0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC10.4□□□□□ -0.74
SYNE2Q8WXH0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC10.4□□□□□ -0.74
SYNE2Q8WXH0 RASSF1-AS1-201ENST00000629828 790 ntBASIC10.4□□□□□ -0.74
SYNE2Q8WXH0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
SYNE2Q8WXH0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SYNE2Q8WXH0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC10.4□□□□□ -0.74
SYNE2Q8WXH0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SYNE2Q8WXH0 IKBKGP1-201ENST00000612193 1073 ntBASIC10.4□□□□□ -0.75
SYNE2Q8WXH0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC10.4□□□□□ -0.75
SYNE2Q8WXH0 BX664725.1-201ENST00000438252 379 ntBASIC10.39□□□□□ -0.75
SYNE2Q8WXH0 AL137784.2-201ENST00000607332 1000 ntBASIC10.39□□□□□ -0.75
SYNE2Q8WXH0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC10.39□□□□□ -0.75
SYNE2Q8WXH0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SYNE2Q8WXH0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC10.39□□□□□ -0.75
SYNE2Q8WXH0 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SYNE2Q8WXH0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
SYNE2Q8WXH0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC10.39□□□□□ -0.75
SYNE2Q8WXH0 TSPY9P-201ENST00000440215 945 ntBASIC10.39□□□□□ -0.75
SYNE2Q8WXH0 TSPY11P-201ENST00000442607 1045 ntBASIC10.39□□□□□ -0.75
SYNE2Q8WXH0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC10.38□□□□□ -0.75
SYNE2Q8WXH0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC10.38□□□□□ -0.75
SYNE2Q8WXH0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SYNE2Q8WXH0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC10.38□□□□□ -0.75
SYNE2Q8WXH0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
SYNE2Q8WXH0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SYNE2Q8WXH0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC10.38□□□□□ -0.75
SYNE2Q8WXH0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
SYNE2Q8WXH0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC10.38□□□□□ -0.75
SYNE2Q8WXH0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC10.38□□□□□ -0.75
SYNE2Q8WXH0 TMEM191A-211ENST00000637163 1067 ntBASIC10.38□□□□□ -0.75
SYNE2Q8WXH0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SYNE2Q8WXH0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SYNE2Q8WXH0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC10.38□□□□□ -0.75
SYNE2Q8WXH0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYNE2Q8WXH0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYNE2Q8WXH0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC10.37□□□□□ -0.75
SYNE2Q8WXH0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC10.37□□□□□ -0.75
SYNE2Q8WXH0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC10.37□□□□□ -0.75
SYNE2Q8WXH0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYNE2Q8WXH0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC10.37□□□□□ -0.75
SYNE2Q8WXH0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC10.37□□□□□ -0.75
SYNE2Q8WXH0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYNE2Q8WXH0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYNE2Q8WXH0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYNE2Q8WXH0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SYNE2Q8WXH0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SYNE2Q8WXH0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC10.36□□□□□ -0.75
SYNE2Q8WXH0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC10.36□□□□□ -0.75
SYNE2Q8WXH0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC10.36□□□□□ -0.75
SYNE2Q8WXH0 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYNE2Q8WXH0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYNE2Q8WXH0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYNE2Q8WXH0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SYNE2Q8WXH0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SYNE2Q8WXH0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
SYNE2Q8WXH0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
SYNE2Q8WXH0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
SYNE2Q8WXH0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SYNE2Q8WXH0 DET1-205ENST00000558413 583 ntTSL 4 BASIC10.35□□□□□ -0.75
SYNE2Q8WXH0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SYNE2Q8WXH0 RAP2CP1-202ENST00000605179 643 ntBASIC10.35□□□□□ -0.75
SYNE2Q8WXH0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC10.35□□□□□ -0.75
SYNE2Q8WXH0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SYNE2Q8WXH0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC10.35□□□□□ -0.75
SYNE2Q8WXH0 SLC47A1P1-202ENST00000449666 945 ntBASIC10.35□□□□□ -0.75
SYNE2Q8WXH0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC10.34□□□□□ -0.75
SYNE2Q8WXH0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
SYNE2Q8WXH0 AP002414.2-202ENST00000590929 1450 ntBASIC10.34□□□□□ -0.75
SYNE2Q8WXH0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC10.34□□□□□ -0.75
SYNE2Q8WXH0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
SYNE2Q8WXH0 AC021242.3-201ENST00000607598 1377 ntBASIC10.34□□□□□ -0.75
SYNE2Q8WXH0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SYNE2Q8WXH0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SYNE2Q8WXH0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SYNE2Q8WXH0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SYNE2Q8WXH0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SYNE2Q8WXH0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC10.34□□□□□ -0.75
SYNE2Q8WXH0 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms