Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
SMIM11BQ8TCY0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
SMIM11BQ8TCY0 AL139125.2-201ENST00000623134 1869 ntBASIC15.88■□□□□ 0.13
SMIM11BQ8TCY0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMIM11BQ8TCY0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC15.88■□□□□ 0.13
SMIM11BQ8TCY0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMIM11BQ8TCY0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMIM11BQ8TCY0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SMIM11BQ8TCY0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMIM11BQ8TCY0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMIM11BQ8TCY0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMIM11BQ8TCY0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SMIM11BQ8TCY0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMIM11BQ8TCY0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMIM11BQ8TCY0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMIM11BQ8TCY0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMIM11BQ8TCY0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMIM11BQ8TCY0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMIM11BQ8TCY0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC15.87■□□□□ 0.13
SMIM11BQ8TCY0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMIM11BQ8TCY0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SMIM11BQ8TCY0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SMIM11BQ8TCY0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMIM11BQ8TCY0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMIM11BQ8TCY0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SMIM11BQ8TCY0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMIM11BQ8TCY0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMIM11BQ8TCY0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMIM11BQ8TCY0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SMIM11BQ8TCY0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SMIM11BQ8TCY0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC15.85■□□□□ 0.13
SMIM11BQ8TCY0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMIM11BQ8TCY0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMIM11BQ8TCY0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMIM11BQ8TCY0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC15.85■□□□□ 0.13
SMIM11BQ8TCY0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC15.84■□□□□ 0.13
SMIM11BQ8TCY0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
SMIM11BQ8TCY0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC15.84■□□□□ 0.13
SMIM11BQ8TCY0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM11BQ8TCY0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM11BQ8TCY0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC15.84■□□□□ 0.13
SMIM11BQ8TCY0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM11BQ8TCY0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM11BQ8TCY0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM11BQ8TCY0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SMIM11BQ8TCY0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMIM11BQ8TCY0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SMIM11BQ8TCY0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SMIM11BQ8TCY0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SMIM11BQ8TCY0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
SMIM11BQ8TCY0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC15.83■□□□□ 0.13
SMIM11BQ8TCY0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMIM11BQ8TCY0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMIM11BQ8TCY0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMIM11BQ8TCY0 AC138932.3-201ENST00000567634 1902 ntBASIC15.83■□□□□ 0.12
SMIM11BQ8TCY0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SMIM11BQ8TCY0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC15.83■□□□□ 0.12
SMIM11BQ8TCY0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMIM11BQ8TCY0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMIM11BQ8TCY0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SMIM11BQ8TCY0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SMIM11BQ8TCY0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMIM11BQ8TCY0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM11BQ8TCY0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM11BQ8TCY0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM11BQ8TCY0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM11BQ8TCY0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM11BQ8TCY0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC15.82■□□□□ 0.12
SMIM11BQ8TCY0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM11BQ8TCY0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM11BQ8TCY0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SMIM11BQ8TCY0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMIM11BQ8TCY0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMIM11BQ8TCY0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMIM11BQ8TCY0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC15.81■□□□□ 0.12
SMIM11BQ8TCY0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SMIM11BQ8TCY0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC15.81■□□□□ 0.12
SMIM11BQ8TCY0 AC022211.4-201ENST00000625094 2161 ntBASIC15.81■□□□□ 0.12
SMIM11BQ8TCY0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM11BQ8TCY0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM11BQ8TCY0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SMIM11BQ8TCY0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM11BQ8TCY0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM11BQ8TCY0 AC142472.1-201ENST00000612013 1741 ntBASIC15.8■□□□□ 0.12
SMIM11BQ8TCY0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM11BQ8TCY0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM11BQ8TCY0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM11BQ8TCY0 AC010501.1-201ENST00000606270 1962 ntBASIC15.79■□□□□ 0.12
SMIM11BQ8TCY0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC15.79■□□□□ 0.12
SMIM11BQ8TCY0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC15.79■□□□□ 0.12
SMIM11BQ8TCY0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC15.79■□□□□ 0.12
SMIM11BQ8TCY0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMIM11BQ8TCY0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11BQ8TCY0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMIM11BQ8TCY0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC15.78■□□□□ 0.12
SMIM11BQ8TCY0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC15.78■□□□□ 0.12
SMIM11BQ8TCY0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMIM11BQ8TCY0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.77■□□□□ 0.12
SMIM11BQ8TCY0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SMIM11BQ8TCY0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms