Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SNIP1Q8TAD8 Z92544.1-202ENST00000571933 1220 ntBASIC23.37■■□□□ 1.33
SNIP1Q8TAD8 AC019171.1-201ENST00000601251 1056 ntBASIC23.37■■□□□ 1.33
SNIP1Q8TAD8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SNIP1Q8TAD8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SNIP1Q8TAD8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SNIP1Q8TAD8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SNIP1Q8TAD8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SNIP1Q8TAD8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.36■■□□□ 1.33
SNIP1Q8TAD8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.36■■□□□ 1.33
SNIP1Q8TAD8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.36■■□□□ 1.33
SNIP1Q8TAD8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SNIP1Q8TAD8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SNIP1Q8TAD8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.34■■□□□ 1.33
SNIP1Q8TAD8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.34■■□□□ 1.33
SNIP1Q8TAD8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.34■■□□□ 1.33
SNIP1Q8TAD8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.34■■□□□ 1.33
SNIP1Q8TAD8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
SNIP1Q8TAD8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SNIP1Q8TAD8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SNIP1Q8TAD8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SNIP1Q8TAD8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
SNIP1Q8TAD8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SNIP1Q8TAD8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
SNIP1Q8TAD8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.33■■□□□ 1.32
SNIP1Q8TAD8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
SNIP1Q8TAD8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SNIP1Q8TAD8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.32■■□□□ 1.32
SNIP1Q8TAD8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SNIP1Q8TAD8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.31■■□□□ 1.32
SNIP1Q8TAD8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
SNIP1Q8TAD8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.3■■□□□ 1.32
SNIP1Q8TAD8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.3■■□□□ 1.32
SNIP1Q8TAD8 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.3■■□□□ 1.32
SNIP1Q8TAD8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SNIP1Q8TAD8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.29■■□□□ 1.32
SNIP1Q8TAD8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.29■■□□□ 1.32
SNIP1Q8TAD8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SNIP1Q8TAD8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SNIP1Q8TAD8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SNIP1Q8TAD8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
SNIP1Q8TAD8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.28■■□□□ 1.32
SNIP1Q8TAD8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.28■■□□□ 1.32
SNIP1Q8TAD8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SNIP1Q8TAD8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SNIP1Q8TAD8 AC100797.4-201ENST00000631653 1827 ntBASIC23.28■■□□□ 1.32
SNIP1Q8TAD8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SNIP1Q8TAD8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.32
SNIP1Q8TAD8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SNIP1Q8TAD8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.27■■□□□ 1.32
SNIP1Q8TAD8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.27■■□□□ 1.32
SNIP1Q8TAD8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SNIP1Q8TAD8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SNIP1Q8TAD8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
SNIP1Q8TAD8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SNIP1Q8TAD8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SNIP1Q8TAD8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SNIP1Q8TAD8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SNIP1Q8TAD8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SNIP1Q8TAD8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.24■■□□□ 1.31
SNIP1Q8TAD8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SNIP1Q8TAD8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SNIP1Q8TAD8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SNIP1Q8TAD8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
SNIP1Q8TAD8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.24■■□□□ 1.31
SNIP1Q8TAD8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SNIP1Q8TAD8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.24■■□□□ 1.31
SNIP1Q8TAD8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.24■■□□□ 1.31
SNIP1Q8TAD8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.23■■□□□ 1.31
SNIP1Q8TAD8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.23■■□□□ 1.31
SNIP1Q8TAD8 AC087393.1-201ENST00000582896 145 ntBASIC23.23■■□□□ 1.31
SNIP1Q8TAD8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SNIP1Q8TAD8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SNIP1Q8TAD8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SNIP1Q8TAD8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.22■■□□□ 1.31
SNIP1Q8TAD8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNIP1Q8TAD8 MIR638-201ENST00000385237 100 ntBASIC23.21■■□□□ 1.31
SNIP1Q8TAD8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.21■■□□□ 1.31
SNIP1Q8TAD8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNIP1Q8TAD8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNIP1Q8TAD8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SNIP1Q8TAD8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SNIP1Q8TAD8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SNIP1Q8TAD8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SNIP1Q8TAD8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SNIP1Q8TAD8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SNIP1Q8TAD8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.2■■□□□ 1.3
SNIP1Q8TAD8 KRT125P-201ENST00000546827 989 ntBASIC23.2■■□□□ 1.3
SNIP1Q8TAD8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.2■■□□□ 1.3
SNIP1Q8TAD8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SNIP1Q8TAD8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SNIP1Q8TAD8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SNIP1Q8TAD8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
SNIP1Q8TAD8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SNIP1Q8TAD8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.19■■□□□ 1.3
SNIP1Q8TAD8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.19■■□□□ 1.3
SNIP1Q8TAD8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.19■■□□□ 1.3
SNIP1Q8TAD8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.19■■□□□ 1.3
SNIP1Q8TAD8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.19■■□□□ 1.3
SNIP1Q8TAD8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms