Protein–RNA interactions for Protein: Q8N9B8

RASGEF1A, Ras-GEF domain-containing family member 1A, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1AQ8N9B8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RASGEF1AQ8N9B8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.28■■□□□ 1.48
RASGEF1AQ8N9B8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.28■■□□□ 1.48
RASGEF1AQ8N9B8 AP004609.3-201ENST00000610705 1884 ntBASIC24.28■■□□□ 1.48
RASGEF1AQ8N9B8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RASGEF1AQ8N9B8 AC025884.2-201ENST00000553429 711 ntBASIC24.27■■□□□ 1.48
RASGEF1AQ8N9B8 SMPD5-203ENST00000639008 1464 ntBASIC24.26■■□□□ 1.47
RASGEF1AQ8N9B8 AL121749.1-202ENST00000609313 2153 ntBASIC24.26■■□□□ 1.47
RASGEF1AQ8N9B8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.26■■□□□ 1.47
RASGEF1AQ8N9B8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
RASGEF1AQ8N9B8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.26■■□□□ 1.47
RASGEF1AQ8N9B8 AC142472.1-201ENST00000612013 1741 ntBASIC24.26■■□□□ 1.47
RASGEF1AQ8N9B8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.26■■□□□ 1.47
RASGEF1AQ8N9B8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RASGEF1AQ8N9B8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RASGEF1AQ8N9B8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RASGEF1AQ8N9B8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
RASGEF1AQ8N9B8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.25■■□□□ 1.47
RASGEF1AQ8N9B8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.25■■□□□ 1.47
RASGEF1AQ8N9B8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.24■■□□□ 1.47
RASGEF1AQ8N9B8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RASGEF1AQ8N9B8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RASGEF1AQ8N9B8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.24■■□□□ 1.47
RASGEF1AQ8N9B8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RASGEF1AQ8N9B8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.24■■□□□ 1.47
RASGEF1AQ8N9B8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
RASGEF1AQ8N9B8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.23■■□□□ 1.47
RASGEF1AQ8N9B8 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.23■■□□□ 1.47
RASGEF1AQ8N9B8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.22■■□□□ 1.47
RASGEF1AQ8N9B8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
RASGEF1AQ8N9B8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RASGEF1AQ8N9B8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RASGEF1AQ8N9B8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.22■■□□□ 1.47
RASGEF1AQ8N9B8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.22■■□□□ 1.47
RASGEF1AQ8N9B8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RASGEF1AQ8N9B8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RASGEF1AQ8N9B8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RASGEF1AQ8N9B8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.21■■□□□ 1.47
RASGEF1AQ8N9B8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
RASGEF1AQ8N9B8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
RASGEF1AQ8N9B8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RASGEF1AQ8N9B8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RASGEF1AQ8N9B8 AC007029.1-201ENST00000604183 313 ntBASIC24.2■■□□□ 1.46
RASGEF1AQ8N9B8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RASGEF1AQ8N9B8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RASGEF1AQ8N9B8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.19■■□□□ 1.46
RASGEF1AQ8N9B8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RASGEF1AQ8N9B8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.19■■□□□ 1.46
RASGEF1AQ8N9B8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.19■■□□□ 1.46
RASGEF1AQ8N9B8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.19■■□□□ 1.46
RASGEF1AQ8N9B8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
RASGEF1AQ8N9B8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
RASGEF1AQ8N9B8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
RASGEF1AQ8N9B8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
RASGEF1AQ8N9B8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RASGEF1AQ8N9B8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RASGEF1AQ8N9B8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.18■■□□□ 1.46
RASGEF1AQ8N9B8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RASGEF1AQ8N9B8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RASGEF1AQ8N9B8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RASGEF1AQ8N9B8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.16■■□□□ 1.46
RASGEF1AQ8N9B8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RASGEF1AQ8N9B8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RASGEF1AQ8N9B8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RASGEF1AQ8N9B8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RASGEF1AQ8N9B8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
RASGEF1AQ8N9B8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.15■■□□□ 1.46
RASGEF1AQ8N9B8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RASGEF1AQ8N9B8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
RASGEF1AQ8N9B8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RASGEF1AQ8N9B8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
RASGEF1AQ8N9B8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
RASGEF1AQ8N9B8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RASGEF1AQ8N9B8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.14■■□□□ 1.45
RASGEF1AQ8N9B8 MIR3960-201ENST00000583311 91 ntBASIC24.14■■□□□ 1.45
RASGEF1AQ8N9B8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
RASGEF1AQ8N9B8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.14■■□□□ 1.45
RASGEF1AQ8N9B8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RASGEF1AQ8N9B8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RASGEF1AQ8N9B8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RASGEF1AQ8N9B8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
RASGEF1AQ8N9B8 RP9P-202ENST00000450133 1212 ntBASIC24.13■■□□□ 1.45
RASGEF1AQ8N9B8 ABHD17AP5-201ENST00000580133 923 ntBASIC24.13■■□□□ 1.45
RASGEF1AQ8N9B8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.13■■□□□ 1.45
RASGEF1AQ8N9B8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.13■■□□□ 1.45
RASGEF1AQ8N9B8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.12■■□□□ 1.45
RASGEF1AQ8N9B8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.12■■□□□ 1.45
RASGEF1AQ8N9B8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.12■■□□□ 1.45
RASGEF1AQ8N9B8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
RASGEF1AQ8N9B8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RASGEF1AQ8N9B8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
RASGEF1AQ8N9B8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RASGEF1AQ8N9B8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
RASGEF1AQ8N9B8 AC093536.1-201ENST00000569153 554 ntBASIC24.11■■□□□ 1.45
RASGEF1AQ8N9B8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RASGEF1AQ8N9B8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
RASGEF1AQ8N9B8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.1■■□□□ 1.45
RASGEF1AQ8N9B8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RASGEF1AQ8N9B8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RASGEF1AQ8N9B8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms