Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TTC9BQ8N6N2 MIR3960-201ENST00000583311 91 ntBASIC26.04■■□□□ 1.76
TTC9BQ8N6N2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.04■■□□□ 1.76
TTC9BQ8N6N2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TTC9BQ8N6N2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
TTC9BQ8N6N2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TTC9BQ8N6N2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
TTC9BQ8N6N2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
TTC9BQ8N6N2 SPCS2P3-201ENST00000500401 656 ntBASIC26.03■■□□□ 1.76
TTC9BQ8N6N2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.03■■□□□ 1.76
TTC9BQ8N6N2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TTC9BQ8N6N2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
TTC9BQ8N6N2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TTC9BQ8N6N2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TTC9BQ8N6N2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.02■■□□□ 1.76
TTC9BQ8N6N2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TTC9BQ8N6N2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TTC9BQ8N6N2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
TTC9BQ8N6N2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TTC9BQ8N6N2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TTC9BQ8N6N2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.01■■□□□ 1.75
TTC9BQ8N6N2 AL449106.1-201ENST00000608517 1980 ntBASIC26.01■■□□□ 1.75
TTC9BQ8N6N2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TTC9BQ8N6N2 DUX4L9-201ENST00000449051 1259 ntBASIC26■■□□□ 1.75
TTC9BQ8N6N2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26■■□□□ 1.75
TTC9BQ8N6N2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26■■□□□ 1.75
TTC9BQ8N6N2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TTC9BQ8N6N2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26■■□□□ 1.75
TTC9BQ8N6N2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
TTC9BQ8N6N2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.99■■□□□ 1.75
TTC9BQ8N6N2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.99■■□□□ 1.75
TTC9BQ8N6N2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.99■■□□□ 1.75
TTC9BQ8N6N2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
TTC9BQ8N6N2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
TTC9BQ8N6N2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TTC9BQ8N6N2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
TTC9BQ8N6N2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.97■■□□□ 1.75
TTC9BQ8N6N2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
TTC9BQ8N6N2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
TTC9BQ8N6N2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TTC9BQ8N6N2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.97■■□□□ 1.75
TTC9BQ8N6N2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.96■■□□□ 1.75
TTC9BQ8N6N2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TTC9BQ8N6N2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TTC9BQ8N6N2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TTC9BQ8N6N2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
TTC9BQ8N6N2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TTC9BQ8N6N2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.95■■□□□ 1.75
TTC9BQ8N6N2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.75
TTC9BQ8N6N2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
TTC9BQ8N6N2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
TTC9BQ8N6N2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
TTC9BQ8N6N2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.94■■□□□ 1.74
TTC9BQ8N6N2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
TTC9BQ8N6N2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.93■■□□□ 1.74
TTC9BQ8N6N2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.93■■□□□ 1.74
TTC9BQ8N6N2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
TTC9BQ8N6N2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
TTC9BQ8N6N2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.93■■□□□ 1.74
TTC9BQ8N6N2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
TTC9BQ8N6N2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TTC9BQ8N6N2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.92■■□□□ 1.74
TTC9BQ8N6N2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.92■■□□□ 1.74
TTC9BQ8N6N2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TTC9BQ8N6N2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
TTC9BQ8N6N2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
TTC9BQ8N6N2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TTC9BQ8N6N2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.9■■□□□ 1.74
TTC9BQ8N6N2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TTC9BQ8N6N2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TTC9BQ8N6N2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
TTC9BQ8N6N2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.9■■□□□ 1.74
TTC9BQ8N6N2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.9■■□□□ 1.74
TTC9BQ8N6N2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TTC9BQ8N6N2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TTC9BQ8N6N2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
TTC9BQ8N6N2 BX255925.1-201ENST00000566954 1854 ntBASIC25.89■■□□□ 1.74
TTC9BQ8N6N2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TTC9BQ8N6N2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TTC9BQ8N6N2 RARRES2P1-201ENST00000474487 481 ntBASIC25.89■■□□□ 1.74
TTC9BQ8N6N2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.89■■□□□ 1.74
TTC9BQ8N6N2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.89■■□□□ 1.74
TTC9BQ8N6N2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
TTC9BQ8N6N2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.88■■□□□ 1.73
TTC9BQ8N6N2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
TTC9BQ8N6N2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
TTC9BQ8N6N2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
TTC9BQ8N6N2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
TTC9BQ8N6N2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
TTC9BQ8N6N2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TTC9BQ8N6N2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TTC9BQ8N6N2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TTC9BQ8N6N2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
TTC9BQ8N6N2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
TTC9BQ8N6N2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TTC9BQ8N6N2 AC142086.6-201ENST00000621154 1765 ntBASIC25.84■■□□□ 1.73
TTC9BQ8N6N2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
TTC9BQ8N6N2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
TTC9BQ8N6N2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
TTC9BQ8N6N2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms