Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HIST3H2BBQ8N257 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
HIST3H2BBQ8N257 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HIST3H2BBQ8N257 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
HIST3H2BBQ8N257 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
HIST3H2BBQ8N257 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST3H2BBQ8N257 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST3H2BBQ8N257 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HIST3H2BBQ8N257 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST3H2BBQ8N257 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST3H2BBQ8N257 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST3H2BBQ8N257 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.51■□□□□ 0.55
HIST3H2BBQ8N257 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST3H2BBQ8N257 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.5■□□□□ 0.55
HIST3H2BBQ8N257 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST3H2BBQ8N257 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST3H2BBQ8N257 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.49■□□□□ 0.55
HIST3H2BBQ8N257 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.49■□□□□ 0.55
HIST3H2BBQ8N257 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST3H2BBQ8N257 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
HIST3H2BBQ8N257 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.49■□□□□ 0.55
HIST3H2BBQ8N257 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST3H2BBQ8N257 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST3H2BBQ8N257 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST3H2BBQ8N257 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST3H2BBQ8N257 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST3H2BBQ8N257 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST3H2BBQ8N257 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST3H2BBQ8N257 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.49■□□□□ 0.55
HIST3H2BBQ8N257 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HIST3H2BBQ8N257 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST3H2BBQ8N257 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST3H2BBQ8N257 SLC25A24-204ENST00000569674 2357 ntBASIC18.48■□□□□ 0.55
HIST3H2BBQ8N257 AC138932.3-201ENST00000567634 1902 ntBASIC18.48■□□□□ 0.55
HIST3H2BBQ8N257 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.48■□□□□ 0.55
HIST3H2BBQ8N257 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.47■□□□□ 0.55
HIST3H2BBQ8N257 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST3H2BBQ8N257 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HIST3H2BBQ8N257 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST3H2BBQ8N257 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIST3H2BBQ8N257 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIST3H2BBQ8N257 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST3H2BBQ8N257 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIST3H2BBQ8N257 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST3H2BBQ8N257 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HIST3H2BBQ8N257 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST3H2BBQ8N257 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST3H2BBQ8N257 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HIST3H2BBQ8N257 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HIST3H2BBQ8N257 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST3H2BBQ8N257 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST3H2BBQ8N257 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST3H2BBQ8N257 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST3H2BBQ8N257 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST3H2BBQ8N257 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIST3H2BBQ8N257 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.46■□□□□ 0.54
HIST3H2BBQ8N257 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
HIST3H2BBQ8N257 AP004833.2-201ENST00000532228 1454 ntBASIC18.46■□□□□ 0.54
HIST3H2BBQ8N257 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST3H2BBQ8N257 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST3H2BBQ8N257 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.45■□□□□ 0.54
HIST3H2BBQ8N257 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST3H2BBQ8N257 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.45■□□□□ 0.54
HIST3H2BBQ8N257 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST3H2BBQ8N257 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
HIST3H2BBQ8N257 DUSP8P5-201ENST00000422884 1815 ntBASIC18.44■□□□□ 0.54
HIST3H2BBQ8N257 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST3H2BBQ8N257 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
HIST3H2BBQ8N257 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST3H2BBQ8N257 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
HIST3H2BBQ8N257 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HIST3H2BBQ8N257 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST3H2BBQ8N257 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST3H2BBQ8N257 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST3H2BBQ8N257 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HIST3H2BBQ8N257 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST3H2BBQ8N257 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
HIST3H2BBQ8N257 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HIST3H2BBQ8N257 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.43■□□□□ 0.54
HIST3H2BBQ8N257 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST3H2BBQ8N257 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HIST3H2BBQ8N257 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST3H2BBQ8N257 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
HIST3H2BBQ8N257 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.43■□□□□ 0.54
HIST3H2BBQ8N257 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
HIST3H2BBQ8N257 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST3H2BBQ8N257 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST3H2BBQ8N257 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST3H2BBQ8N257 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST3H2BBQ8N257 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HIST3H2BBQ8N257 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST3H2BBQ8N257 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIST3H2BBQ8N257 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIST3H2BBQ8N257 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.41■□□□□ 0.54
HIST3H2BBQ8N257 AC097639.1-201ENST00000565519 1891 ntBASIC18.41■□□□□ 0.54
HIST3H2BBQ8N257 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.41■□□□□ 0.54
HIST3H2BBQ8N257 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIST3H2BBQ8N257 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIST3H2BBQ8N257 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
HIST3H2BBQ8N257 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms