Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RP1L1Q8IWN7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
RP1L1Q8IWN7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
RP1L1Q8IWN7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.33■■□□□ 1.16
RP1L1Q8IWN7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RP1L1Q8IWN7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RP1L1Q8IWN7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RP1L1Q8IWN7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RP1L1Q8IWN7 ABCB10P1-201ENST00000614297 2181 ntBASIC22.32■■□□□ 1.16
RP1L1Q8IWN7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.32■■□□□ 1.16
RP1L1Q8IWN7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RP1L1Q8IWN7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.32■■□□□ 1.16
RP1L1Q8IWN7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.32■■□□□ 1.16
RP1L1Q8IWN7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
RP1L1Q8IWN7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.32■■□□□ 1.16
RP1L1Q8IWN7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.32■■□□□ 1.16
RP1L1Q8IWN7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RP1L1Q8IWN7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.31■■□□□ 1.16
RP1L1Q8IWN7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.3■■□□□ 1.16
RP1L1Q8IWN7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
RP1L1Q8IWN7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
RP1L1Q8IWN7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.3■■□□□ 1.16
RP1L1Q8IWN7 AL031848.2-201ENST00000607670 837 ntBASIC22.3■■□□□ 1.16
RP1L1Q8IWN7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RP1L1Q8IWN7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
RP1L1Q8IWN7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.3■■□□□ 1.16
RP1L1Q8IWN7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RP1L1Q8IWN7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RP1L1Q8IWN7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.29■■□□□ 1.16
RP1L1Q8IWN7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RP1L1Q8IWN7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.29■■□□□ 1.16
RP1L1Q8IWN7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RP1L1Q8IWN7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
RP1L1Q8IWN7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
RP1L1Q8IWN7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
RP1L1Q8IWN7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.28■■□□□ 1.16
RP1L1Q8IWN7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RP1L1Q8IWN7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
RP1L1Q8IWN7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RP1L1Q8IWN7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.28■■□□□ 1.16
RP1L1Q8IWN7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RP1L1Q8IWN7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RP1L1Q8IWN7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.27■■□□□ 1.15
RP1L1Q8IWN7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RP1L1Q8IWN7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RP1L1Q8IWN7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RP1L1Q8IWN7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.26■■□□□ 1.15
RP1L1Q8IWN7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RP1L1Q8IWN7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RP1L1Q8IWN7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RP1L1Q8IWN7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.25■■□□□ 1.15
RP1L1Q8IWN7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RP1L1Q8IWN7 AC008406.3-201ENST00000620001 1374 ntBASIC22.25■■□□□ 1.15
RP1L1Q8IWN7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RP1L1Q8IWN7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RP1L1Q8IWN7 AC018755.3-202ENST00000596210 929 ntBASIC22.24■■□□□ 1.15
RP1L1Q8IWN7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RP1L1Q8IWN7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.24■■□□□ 1.15
RP1L1Q8IWN7 KRT125P-201ENST00000546827 989 ntBASIC22.24■■□□□ 1.15
RP1L1Q8IWN7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.24■■□□□ 1.15
RP1L1Q8IWN7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
RP1L1Q8IWN7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.23■■□□□ 1.15
RP1L1Q8IWN7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.23■■□□□ 1.15
RP1L1Q8IWN7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RP1L1Q8IWN7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RP1L1Q8IWN7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.22■■□□□ 1.15
RP1L1Q8IWN7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RP1L1Q8IWN7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.21■■□□□ 1.15
RP1L1Q8IWN7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RP1L1Q8IWN7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.21■■□□□ 1.15
RP1L1Q8IWN7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.2■■□□□ 1.14
RP1L1Q8IWN7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RP1L1Q8IWN7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RP1L1Q8IWN7 MIR3960-201ENST00000583311 91 ntBASIC22.2■■□□□ 1.14
RP1L1Q8IWN7 AC139426.1-201ENST00000568218 2529 ntBASIC22.2■■□□□ 1.14
RP1L1Q8IWN7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RP1L1Q8IWN7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.19■■□□□ 1.14
RP1L1Q8IWN7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
RP1L1Q8IWN7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
RP1L1Q8IWN7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RP1L1Q8IWN7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RP1L1Q8IWN7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RP1L1Q8IWN7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.18■■□□□ 1.14
RP1L1Q8IWN7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
RP1L1Q8IWN7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.17■■□□□ 1.14
RP1L1Q8IWN7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RP1L1Q8IWN7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RP1L1Q8IWN7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RP1L1Q8IWN7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.16■■□□□ 1.14
RP1L1Q8IWN7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.16■■□□□ 1.14
RP1L1Q8IWN7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RP1L1Q8IWN7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
RP1L1Q8IWN7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RP1L1Q8IWN7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RP1L1Q8IWN7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.16■■□□□ 1.14
RP1L1Q8IWN7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RP1L1Q8IWN7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RP1L1Q8IWN7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.15■■□□□ 1.14
RP1L1Q8IWN7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RP1L1Q8IWN7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms