Protein–RNA interactions for Protein: Q8IUF1

CBWD2, COBW domain-containing protein 2, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2Q8IUF1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CBWD2Q8IUF1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CBWD2Q8IUF1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
CBWD2Q8IUF1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.79■■□□□ 1.88
CBWD2Q8IUF1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CBWD2Q8IUF1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CBWD2Q8IUF1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.79■■□□□ 1.88
CBWD2Q8IUF1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.78■■□□□ 1.88
CBWD2Q8IUF1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CBWD2Q8IUF1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CBWD2Q8IUF1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CBWD2Q8IUF1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CBWD2Q8IUF1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
CBWD2Q8IUF1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CBWD2Q8IUF1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.77■■□□□ 1.88
CBWD2Q8IUF1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.77■■□□□ 1.88
CBWD2Q8IUF1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.77■■□□□ 1.88
CBWD2Q8IUF1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
CBWD2Q8IUF1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CBWD2Q8IUF1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CBWD2Q8IUF1 HSD17B1P1-201ENST00000590052 955 ntBASIC26.76■■□□□ 1.87
CBWD2Q8IUF1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
CBWD2Q8IUF1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.75■■□□□ 1.87
CBWD2Q8IUF1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CBWD2Q8IUF1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.75■■□□□ 1.87
CBWD2Q8IUF1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.75■■□□□ 1.87
CBWD2Q8IUF1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.75■■□□□ 1.87
CBWD2Q8IUF1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CBWD2Q8IUF1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CBWD2Q8IUF1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.74■■□□□ 1.87
CBWD2Q8IUF1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
CBWD2Q8IUF1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
CBWD2Q8IUF1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
CBWD2Q8IUF1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CBWD2Q8IUF1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CBWD2Q8IUF1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CBWD2Q8IUF1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CBWD2Q8IUF1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CBWD2Q8IUF1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CBWD2Q8IUF1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CBWD2Q8IUF1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
CBWD2Q8IUF1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
CBWD2Q8IUF1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.72■■□□□ 1.87
CBWD2Q8IUF1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CBWD2Q8IUF1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.71■■□□□ 1.87
CBWD2Q8IUF1 ECEL1P2-201ENST00000461596 1295 ntBASIC26.71■■□□□ 1.87
CBWD2Q8IUF1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CBWD2Q8IUF1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CBWD2Q8IUF1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CBWD2Q8IUF1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.7■■□□□ 1.86
CBWD2Q8IUF1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CBWD2Q8IUF1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.69■■□□□ 1.86
CBWD2Q8IUF1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.69■■□□□ 1.86
CBWD2Q8IUF1 AC025884.2-201ENST00000553429 711 ntBASIC26.68■■□□□ 1.86
CBWD2Q8IUF1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.68■■□□□ 1.86
CBWD2Q8IUF1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CBWD2Q8IUF1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CBWD2Q8IUF1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
CBWD2Q8IUF1 RNF126P1-201ENST00000567452 1320 ntBASIC26.67■■□□□ 1.86
CBWD2Q8IUF1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.67■■□□□ 1.86
CBWD2Q8IUF1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
CBWD2Q8IUF1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.67■■□□□ 1.86
CBWD2Q8IUF1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.67■■□□□ 1.86
CBWD2Q8IUF1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
CBWD2Q8IUF1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.66■■□□□ 1.86
CBWD2Q8IUF1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.66■■□□□ 1.86
CBWD2Q8IUF1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CBWD2Q8IUF1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CBWD2Q8IUF1 SMPD5-203ENST00000639008 1464 ntBASIC26.66■■□□□ 1.86
CBWD2Q8IUF1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
CBWD2Q8IUF1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CBWD2Q8IUF1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CBWD2Q8IUF1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CBWD2Q8IUF1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.65■■□□□ 1.86
CBWD2Q8IUF1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CBWD2Q8IUF1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.64■■□□□ 1.86
CBWD2Q8IUF1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CBWD2Q8IUF1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CBWD2Q8IUF1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.64■■□□□ 1.86
CBWD2Q8IUF1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CBWD2Q8IUF1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CBWD2Q8IUF1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.63■■□□□ 1.85
CBWD2Q8IUF1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CBWD2Q8IUF1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.63■■□□□ 1.85
CBWD2Q8IUF1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.63■■□□□ 1.85
CBWD2Q8IUF1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
CBWD2Q8IUF1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.63■■□□□ 1.85
CBWD2Q8IUF1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.63■■□□□ 1.85
CBWD2Q8IUF1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CBWD2Q8IUF1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CBWD2Q8IUF1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CBWD2Q8IUF1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
CBWD2Q8IUF1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
CBWD2Q8IUF1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.61■■□□□ 1.85
CBWD2Q8IUF1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CBWD2Q8IUF1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CBWD2Q8IUF1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CBWD2Q8IUF1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CBWD2Q8IUF1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.61■■□□□ 1.85
CBWD2Q8IUF1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms