Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 GRAMD4P7-201ENST00000578182 1232 ntBASIC29.75■■■□□ 2.35
USP50Q70EL3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
USP50Q70EL3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
USP50Q70EL3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
USP50Q70EL3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC29.74■■■□□ 2.35
USP50Q70EL3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC29.74■■■□□ 2.35
USP50Q70EL3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC29.74■■■□□ 2.35
USP50Q70EL3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
USP50Q70EL3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
USP50Q70EL3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC29.73■■■□□ 2.35
USP50Q70EL3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC29.73■■■□□ 2.35
USP50Q70EL3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
USP50Q70EL3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
USP50Q70EL3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC29.72■■■□□ 2.35
USP50Q70EL3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC29.72■■■□□ 2.35
USP50Q70EL3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
USP50Q70EL3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC29.71■■■□□ 2.35
USP50Q70EL3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
USP50Q70EL3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.35
USP50Q70EL3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
USP50Q70EL3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
USP50Q70EL3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC29.68■■■□□ 2.34
USP50Q70EL3 AC087393.1-201ENST00000582896 145 ntBASIC29.68■■■□□ 2.34
USP50Q70EL3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
USP50Q70EL3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC29.68■■■□□ 2.34
USP50Q70EL3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
USP50Q70EL3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
USP50Q70EL3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.68■■■□□ 2.34
USP50Q70EL3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
USP50Q70EL3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.67■■■□□ 2.34
USP50Q70EL3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
USP50Q70EL3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
USP50Q70EL3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC29.66■■■□□ 2.34
USP50Q70EL3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC29.66■■■□□ 2.34
USP50Q70EL3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC29.66■■■□□ 2.34
USP50Q70EL3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
USP50Q70EL3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
USP50Q70EL3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
USP50Q70EL3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
USP50Q70EL3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
USP50Q70EL3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
USP50Q70EL3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC29.64■■■□□ 2.34
USP50Q70EL3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
USP50Q70EL3 MIR638-201ENST00000385237 100 ntBASIC29.63■■■□□ 2.33
USP50Q70EL3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
USP50Q70EL3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
USP50Q70EL3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
USP50Q70EL3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
USP50Q70EL3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
USP50Q70EL3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
USP50Q70EL3 AL359504.2-201ENST00000605506 1601 ntBASIC29.61■■■□□ 2.33
USP50Q70EL3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
USP50Q70EL3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC29.61■■■□□ 2.33
USP50Q70EL3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC29.61■■■□□ 2.33
USP50Q70EL3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
USP50Q70EL3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
USP50Q70EL3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.6■■■□□ 2.33
USP50Q70EL3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
USP50Q70EL3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC29.6■■■□□ 2.33
USP50Q70EL3 KRT125P-201ENST00000546827 989 ntBASIC29.6■■■□□ 2.33
USP50Q70EL3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC29.6■■■□□ 2.33
USP50Q70EL3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC29.6■■■□□ 2.33
USP50Q70EL3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.6■■■□□ 2.33
USP50Q70EL3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.59■■■□□ 2.33
USP50Q70EL3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
USP50Q70EL3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
USP50Q70EL3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC29.58■■■□□ 2.33
USP50Q70EL3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
USP50Q70EL3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC29.58■■■□□ 2.33
USP50Q70EL3 LONRF2P2-201ENST00000439212 571 ntBASIC29.58■■■□□ 2.33
USP50Q70EL3 MIR4787-201ENST00000607364 84 ntBASIC29.58■■■□□ 2.33
USP50Q70EL3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC29.57■■■□□ 2.32
USP50Q70EL3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC29.57■■■□□ 2.32
USP50Q70EL3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC29.57■■■□□ 2.32
USP50Q70EL3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
USP50Q70EL3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.56■■■□□ 2.32
USP50Q70EL3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
USP50Q70EL3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC29.56■■■□□ 2.32
USP50Q70EL3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
USP50Q70EL3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
USP50Q70EL3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
USP50Q70EL3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC29.55■■■□□ 2.32
USP50Q70EL3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
USP50Q70EL3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
USP50Q70EL3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
USP50Q70EL3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
USP50Q70EL3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
USP50Q70EL3 BX664725.1-201ENST00000438252 379 ntBASIC29.53■■■□□ 2.32
USP50Q70EL3 RPS2P7-201ENST00000447334 885 ntBASIC29.53■■■□□ 2.32
USP50Q70EL3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC29.53■■■□□ 2.32
USP50Q70EL3 UNC93B8-201ENST00000511903 705 ntBASIC29.53■■■□□ 2.32
USP50Q70EL3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
USP50Q70EL3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
USP50Q70EL3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
USP50Q70EL3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.32
USP50Q70EL3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC29.51■■■□□ 2.31
USP50Q70EL3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
USP50Q70EL3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
USP50Q70EL3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
USP50Q70EL3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms