Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PTCRAQ6ISU1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
PTCRAQ6ISU1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.9■■□□□ 1.74
PTCRAQ6ISU1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.9■■□□□ 1.74
PTCRAQ6ISU1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PTCRAQ6ISU1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
PTCRAQ6ISU1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.89■■□□□ 1.74
PTCRAQ6ISU1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.89■■□□□ 1.74
PTCRAQ6ISU1 AL139246.5-201ENST00000606645 996 ntBASIC25.89■■□□□ 1.74
PTCRAQ6ISU1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PTCRAQ6ISU1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.89■■□□□ 1.73
PTCRAQ6ISU1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PTCRAQ6ISU1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.88■■□□□ 1.73
PTCRAQ6ISU1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.88■■□□□ 1.73
PTCRAQ6ISU1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.88■■□□□ 1.73
PTCRAQ6ISU1 MIR4787-201ENST00000607364 84 ntBASIC25.88■■□□□ 1.73
PTCRAQ6ISU1 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.88■■□□□ 1.73
PTCRAQ6ISU1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PTCRAQ6ISU1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PTCRAQ6ISU1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
PTCRAQ6ISU1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.87■■□□□ 1.73
PTCRAQ6ISU1 LONRF2P2-201ENST00000439212 571 ntBASIC25.87■■□□□ 1.73
PTCRAQ6ISU1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.86■■□□□ 1.73
PTCRAQ6ISU1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PTCRAQ6ISU1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PTCRAQ6ISU1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PTCRAQ6ISU1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.86■■□□□ 1.73
PTCRAQ6ISU1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.85■■□□□ 1.73
PTCRAQ6ISU1 KRT16P3-201ENST00000439127 1283 ntBASIC25.85■■□□□ 1.73
PTCRAQ6ISU1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
PTCRAQ6ISU1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PTCRAQ6ISU1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PTCRAQ6ISU1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PTCRAQ6ISU1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
PTCRAQ6ISU1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PTCRAQ6ISU1 UNC93B8-201ENST00000511903 705 ntBASIC25.84■■□□□ 1.73
PTCRAQ6ISU1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.84■■□□□ 1.73
PTCRAQ6ISU1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.83■■□□□ 1.73
PTCRAQ6ISU1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
PTCRAQ6ISU1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
PTCRAQ6ISU1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.83■■□□□ 1.73
PTCRAQ6ISU1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.83■■□□□ 1.73
PTCRAQ6ISU1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.83■■□□□ 1.73
PTCRAQ6ISU1 AC100797.4-201ENST00000631653 1827 ntBASIC25.83■■□□□ 1.73
PTCRAQ6ISU1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PTCRAQ6ISU1 BX664725.1-201ENST00000438252 379 ntBASIC25.82■■□□□ 1.72
PTCRAQ6ISU1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PTCRAQ6ISU1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PTCRAQ6ISU1 AC087393.1-201ENST00000582896 145 ntBASIC25.82■■□□□ 1.72
PTCRAQ6ISU1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.82■■□□□ 1.72
PTCRAQ6ISU1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PTCRAQ6ISU1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.81■■□□□ 1.72
PTCRAQ6ISU1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.81■■□□□ 1.72
PTCRAQ6ISU1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
PTCRAQ6ISU1 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PTCRAQ6ISU1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.81■■□□□ 1.72
PTCRAQ6ISU1 AP004833.2-201ENST00000532228 1454 ntBASIC25.8■■□□□ 1.72
PTCRAQ6ISU1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PTCRAQ6ISU1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PTCRAQ6ISU1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
PTCRAQ6ISU1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PTCRAQ6ISU1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
PTCRAQ6ISU1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.78■■□□□ 1.72
PTCRAQ6ISU1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTCRAQ6ISU1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTCRAQ6ISU1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.77■■□□□ 1.72
PTCRAQ6ISU1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PTCRAQ6ISU1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTCRAQ6ISU1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PTCRAQ6ISU1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PTCRAQ6ISU1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.75■■□□□ 1.71
PTCRAQ6ISU1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PTCRAQ6ISU1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PTCRAQ6ISU1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PTCRAQ6ISU1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
PTCRAQ6ISU1 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PTCRAQ6ISU1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.73■■□□□ 1.71
PTCRAQ6ISU1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PTCRAQ6ISU1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.72■■□□□ 1.71
PTCRAQ6ISU1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PTCRAQ6ISU1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.72■■□□□ 1.71
PTCRAQ6ISU1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PTCRAQ6ISU1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.72■■□□□ 1.71
PTCRAQ6ISU1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
PTCRAQ6ISU1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.72■■□□□ 1.71
PTCRAQ6ISU1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
PTCRAQ6ISU1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
PTCRAQ6ISU1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
PTCRAQ6ISU1 RPS2P7-201ENST00000447334 885 ntBASIC25.71■■□□□ 1.71
PTCRAQ6ISU1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.71■■□□□ 1.71
PTCRAQ6ISU1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PTCRAQ6ISU1 AL359504.2-201ENST00000605506 1601 ntBASIC25.7■■□□□ 1.71
PTCRAQ6ISU1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PTCRAQ6ISU1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.7■■□□□ 1.7
PTCRAQ6ISU1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.7■■□□□ 1.7
PTCRAQ6ISU1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
PTCRAQ6ISU1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PTCRAQ6ISU1 TSPY9P-201ENST00000440215 945 ntBASIC25.69■■□□□ 1.7
PTCRAQ6ISU1 TSPY11P-201ENST00000442607 1045 ntBASIC25.69■■□□□ 1.7
PTCRAQ6ISU1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.69■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms