Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC28.37■■■□□ 2.13
USH1GQ495M9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
USH1GQ495M9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
USH1GQ495M9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
USH1GQ495M9 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.37■■■□□ 2.13
USH1GQ495M9 MIR3960-201ENST00000583311 91 ntBASIC28.37■■■□□ 2.13
USH1GQ495M9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
USH1GQ495M9 AC004987.1-201ENST00000428627 508 ntBASIC28.36■■■□□ 2.13
USH1GQ495M9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
USH1GQ495M9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.36■■■□□ 2.13
USH1GQ495M9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
USH1GQ495M9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC28.35■■■□□ 2.13
USH1GQ495M9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
USH1GQ495M9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
USH1GQ495M9 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
USH1GQ495M9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
USH1GQ495M9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
USH1GQ495M9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
USH1GQ495M9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
USH1GQ495M9 HES4-204ENST00000484667 667 ntTSL 3 BASIC28.34■■■□□ 2.13
USH1GQ495M9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
USH1GQ495M9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
USH1GQ495M9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.33■■■□□ 2.13
USH1GQ495M9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
USH1GQ495M9 ATP5G2P3-201ENST00000429083 425 ntBASIC28.33■■■□□ 2.13
USH1GQ495M9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
USH1GQ495M9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
USH1GQ495M9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
USH1GQ495M9 TSPY13P-201ENST00000338964 914 ntBASIC28.32■■■□□ 2.12
USH1GQ495M9 AC129492.7-201ENST00000622992 756 ntBASIC28.32■■■□□ 2.12
USH1GQ495M9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
USH1GQ495M9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
USH1GQ495M9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.31■■■□□ 2.12
USH1GQ495M9 RAP2CP1-202ENST00000605179 643 ntBASIC28.31■■■□□ 2.12
USH1GQ495M9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
USH1GQ495M9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
USH1GQ495M9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
USH1GQ495M9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
USH1GQ495M9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
USH1GQ495M9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
USH1GQ495M9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
USH1GQ495M9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
USH1GQ495M9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.27■■■□□ 2.12
USH1GQ495M9 DUX4L18-201ENST00000553347 1267 ntBASIC28.27■■■□□ 2.12
USH1GQ495M9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC28.27■■■□□ 2.12
USH1GQ495M9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.12
USH1GQ495M9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
USH1GQ495M9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.26■■■□□ 2.11
USH1GQ495M9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
USH1GQ495M9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
USH1GQ495M9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
USH1GQ495M9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
USH1GQ495M9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.24■■■□□ 2.11
USH1GQ495M9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
USH1GQ495M9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
USH1GQ495M9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
USH1GQ495M9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
USH1GQ495M9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
USH1GQ495M9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
USH1GQ495M9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC28.22■■■□□ 2.11
USH1GQ495M9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
USH1GQ495M9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC28.22■■■□□ 2.11
USH1GQ495M9 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.22■■■□□ 2.11
USH1GQ495M9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
USH1GQ495M9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
USH1GQ495M9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
USH1GQ495M9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
USH1GQ495M9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC28.21■■■□□ 2.11
USH1GQ495M9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
USH1GQ495M9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.21■■■□□ 2.11
USH1GQ495M9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
USH1GQ495M9 DUX4L9-201ENST00000449051 1259 ntBASIC28.21■■■□□ 2.11
USH1GQ495M9 SPCS2P3-201ENST00000500401 656 ntBASIC28.21■■■□□ 2.11
USH1GQ495M9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC28.21■■■□□ 2.11
USH1GQ495M9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
USH1GQ495M9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
USH1GQ495M9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
USH1GQ495M9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
USH1GQ495M9 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC28.19■■■□□ 2.1
USH1GQ495M9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
USH1GQ495M9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
USH1GQ495M9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
USH1GQ495M9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
USH1GQ495M9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
USH1GQ495M9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
USH1GQ495M9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
USH1GQ495M9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC28.17■■■□□ 2.1
USH1GQ495M9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
USH1GQ495M9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC28.17■■■□□ 2.1
USH1GQ495M9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC28.17■■■□□ 2.1
USH1GQ495M9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
USH1GQ495M9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
USH1GQ495M9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC28.16■■■□□ 2.1
USH1GQ495M9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
USH1GQ495M9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
USH1GQ495M9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC28.15■■■□□ 2.1
USH1GQ495M9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC28.15■■■□□ 2.1
USH1GQ495M9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
USH1GQ495M9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
USH1GQ495M9 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms