Protein–RNA interactions for Protein: Q3C1V0

MS4A18, Membrane-spanning 4-domains subfamily A member 18, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A18Q3C1V0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
MS4A18Q3C1V0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
MS4A18Q3C1V0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
MS4A18Q3C1V0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
MS4A18Q3C1V0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
MS4A18Q3C1V0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.01■■□□□ 1.11
MS4A18Q3C1V0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22■■□□□ 1.11
MS4A18Q3C1V0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MS4A18Q3C1V0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MS4A18Q3C1V0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MS4A18Q3C1V0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MS4A18Q3C1V0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MS4A18Q3C1V0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
MS4A18Q3C1V0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
MS4A18Q3C1V0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
MS4A18Q3C1V0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
MS4A18Q3C1V0 AC126177.7-201ENST00000547904 679 ntBASIC21.98■■□□□ 1.11
MS4A18Q3C1V0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.98■■□□□ 1.11
MS4A18Q3C1V0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
MS4A18Q3C1V0 AC091060.1-201ENST00000623524 1766 ntBASIC21.97■■□□□ 1.11
MS4A18Q3C1V0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
MS4A18Q3C1V0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.97■■□□□ 1.11
MS4A18Q3C1V0 AL359504.2-201ENST00000605506 1601 ntBASIC21.97■■□□□ 1.11
MS4A18Q3C1V0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
MS4A18Q3C1V0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MS4A18Q3C1V0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MS4A18Q3C1V0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MS4A18Q3C1V0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
MS4A18Q3C1V0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MS4A18Q3C1V0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
MS4A18Q3C1V0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.96■■□□□ 1.11
MS4A18Q3C1V0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MS4A18Q3C1V0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
MS4A18Q3C1V0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
MS4A18Q3C1V0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
MS4A18Q3C1V0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
MS4A18Q3C1V0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
MS4A18Q3C1V0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.94■■□□□ 1.1
MS4A18Q3C1V0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.94■■□□□ 1.1
MS4A18Q3C1V0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MS4A18Q3C1V0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
MS4A18Q3C1V0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MS4A18Q3C1V0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MS4A18Q3C1V0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.94■■□□□ 1.1
MS4A18Q3C1V0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.94■■□□□ 1.1
MS4A18Q3C1V0 MIR4449-201ENST00000578365 66 ntBASIC21.93■■□□□ 1.1
MS4A18Q3C1V0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
MS4A18Q3C1V0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MS4A18Q3C1V0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MS4A18Q3C1V0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MS4A18Q3C1V0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.92■■□□□ 1.1
MS4A18Q3C1V0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
MS4A18Q3C1V0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MS4A18Q3C1V0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MS4A18Q3C1V0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MS4A18Q3C1V0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
MS4A18Q3C1V0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.91■■□□□ 1.1
MS4A18Q3C1V0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.91■■□□□ 1.1
MS4A18Q3C1V0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MS4A18Q3C1V0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MS4A18Q3C1V0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MS4A18Q3C1V0 AC060814.1-201ENST00000554326 538 ntBASIC21.9■■□□□ 1.1
MS4A18Q3C1V0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MS4A18Q3C1V0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MS4A18Q3C1V0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MS4A18Q3C1V0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MS4A18Q3C1V0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MS4A18Q3C1V0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MS4A18Q3C1V0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.89■■□□□ 1.09
MS4A18Q3C1V0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
MS4A18Q3C1V0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MS4A18Q3C1V0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
MS4A18Q3C1V0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.89■■□□□ 1.09
MS4A18Q3C1V0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MS4A18Q3C1V0 AC092803.2-201ENST00000564287 1899 ntBASIC21.88■■□□□ 1.09
MS4A18Q3C1V0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.88■■□□□ 1.09
MS4A18Q3C1V0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.88■■□□□ 1.09
MS4A18Q3C1V0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MS4A18Q3C1V0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MS4A18Q3C1V0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MS4A18Q3C1V0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.88■■□□□ 1.09
MS4A18Q3C1V0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.87■■□□□ 1.09
MS4A18Q3C1V0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MS4A18Q3C1V0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
MS4A18Q3C1V0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MS4A18Q3C1V0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MS4A18Q3C1V0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MS4A18Q3C1V0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
MS4A18Q3C1V0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MS4A18Q3C1V0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.86■■□□□ 1.09
MS4A18Q3C1V0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.86■■□□□ 1.09
MS4A18Q3C1V0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MS4A18Q3C1V0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MS4A18Q3C1V0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MS4A18Q3C1V0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
MS4A18Q3C1V0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
MS4A18Q3C1V0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.86■■□□□ 1.09
MS4A18Q3C1V0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.85■■□□□ 1.09
MS4A18Q3C1V0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
MS4A18Q3C1V0 AL157400.5-201ENST00000507624 621 ntBASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms