Protein–RNA interactions for Protein: P62979

RPS27A, Ubiquitin-40S ribosomal protein S27a, humanhuman

Known RBP Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27AP62979 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPS27AP62979 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPS27AP62979 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPS27AP62979 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPS27AP62979 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.98■□□□□ 0.95
RPS27AP62979 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPS27AP62979 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RPS27AP62979 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.98■□□□□ 0.95
RPS27AP62979 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPS27AP62979 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.98■□□□□ 0.95
RPS27AP62979 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPS27AP62979 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPS27AP62979 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPS27AP62979 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPS27AP62979 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPS27AP62979 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPS27AP62979 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.97■□□□□ 0.95
RPS27AP62979 AC044849.2-201ENST00000606596 710 ntBASIC20.96■□□□□ 0.95
RPS27AP62979 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPS27AP62979 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPS27AP62979 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPS27AP62979 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPS27AP62979 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RPS27AP62979 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPS27AP62979 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPS27AP62979 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPS27AP62979 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPS27AP62979 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPS27AP62979 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.95■□□□□ 0.94
RPS27AP62979 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPS27AP62979 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPS27AP62979 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPS27AP62979 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.94■□□□□ 0.94
RPS27AP62979 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPS27AP62979 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.94■□□□□ 0.94
RPS27AP62979 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPS27AP62979 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPS27AP62979 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.93■□□□□ 0.94
RPS27AP62979 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPS27AP62979 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPS27AP62979 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPS27AP62979 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPS27AP62979 AL162393.1-201ENST00000437852 946 ntBASIC20.92■□□□□ 0.94
RPS27AP62979 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.92■□□□□ 0.94
RPS27AP62979 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPS27AP62979 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPS27AP62979 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPS27AP62979 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPS27AP62979 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPS27AP62979 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.91■□□□□ 0.94
RPS27AP62979 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPS27AP62979 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
RPS27AP62979 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.91■□□□□ 0.94
RPS27AP62979 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPS27AP62979 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPS27AP62979 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RPS27AP62979 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPS27AP62979 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPS27AP62979 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPS27AP62979 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.9■□□□□ 0.94
RPS27AP62979 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPS27AP62979 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPS27AP62979 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPS27AP62979 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.89■□□□□ 0.94
RPS27AP62979 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RPS27AP62979 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RPS27AP62979 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPS27AP62979 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.89■□□□□ 0.93
RPS27AP62979 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.89■□□□□ 0.93
RPS27AP62979 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.88■□□□□ 0.93
RPS27AP62979 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
RPS27AP62979 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPS27AP62979 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPS27AP62979 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPS27AP62979 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.88■□□□□ 0.93
RPS27AP62979 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.88■□□□□ 0.93
RPS27AP62979 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPS27AP62979 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPS27AP62979 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS27AP62979 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS27AP62979 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS27AP62979 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RPS27AP62979 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.87■□□□□ 0.93
RPS27AP62979 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.87■□□□□ 0.93
RPS27AP62979 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RPS27AP62979 AC021231.2-201ENST00000594613 730 ntBASIC20.87■□□□□ 0.93
RPS27AP62979 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS27AP62979 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPS27AP62979 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPS27AP62979 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS27AP62979 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPS27AP62979 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.86■□□□□ 0.93
RPS27AP62979 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RPS27AP62979 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPS27AP62979 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPS27AP62979 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPS27AP62979 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPS27AP62979 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPS27AP62979 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPS27AP62979 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms