Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 DUX4L15-201ENST00000611059 1267 ntBASIC20.1■□□□□ 0.81
THBS3P49746 DUX4L23-201ENST00000615195 1269 ntBASIC20.1■□□□□ 0.81
THBS3P49746 DUX4L24-201ENST00000617576 1269 ntBASIC20.1■□□□□ 0.81
THBS3P49746 DUX4L22-201ENST00000618238 1269 ntBASIC20.1■□□□□ 0.81
THBS3P49746 DUX4L20-201ENST00000619712 1269 ntBASIC20.1■□□□□ 0.81
THBS3P49746 DUX4L21-201ENST00000622058 1269 ntBASIC20.1■□□□□ 0.81
THBS3P49746 DUX4L10-201ENST00000622460 1267 ntBASIC20.1■□□□□ 0.81
THBS3P49746 DUX4L25-201ENST00000624915 1269 ntBASIC20.1■□□□□ 0.81
THBS3P49746 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
THBS3P49746 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
THBS3P49746 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.09■□□□□ 0.81
THBS3P49746 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
THBS3P49746 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
THBS3P49746 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
THBS3P49746 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.09■□□□□ 0.81
THBS3P49746 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
THBS3P49746 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
THBS3P49746 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
THBS3P49746 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
THBS3P49746 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
THBS3P49746 AC008813.1-201ENST00000536597 885 ntBASIC20.08■□□□□ 0.81
THBS3P49746 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.08■□□□□ 0.81
THBS3P49746 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
THBS3P49746 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.07■□□□□ 0.8
THBS3P49746 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.07■□□□□ 0.8
THBS3P49746 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
THBS3P49746 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THBS3P49746 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THBS3P49746 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THBS3P49746 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THBS3P49746 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
THBS3P49746 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
THBS3P49746 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THBS3P49746 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
THBS3P49746 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
THBS3P49746 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
THBS3P49746 AC145676.1-201ENST00000514988 2004 ntBASIC20.06■□□□□ 0.8
THBS3P49746 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.06■□□□□ 0.8
THBS3P49746 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
THBS3P49746 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
THBS3P49746 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
THBS3P49746 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.05■□□□□ 0.8
THBS3P49746 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
THBS3P49746 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
THBS3P49746 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
THBS3P49746 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.05■□□□□ 0.8
THBS3P49746 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
THBS3P49746 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THBS3P49746 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THBS3P49746 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.04■□□□□ 0.8
THBS3P49746 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THBS3P49746 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.04■□□□□ 0.8
THBS3P49746 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
THBS3P49746 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
THBS3P49746 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
THBS3P49746 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
THBS3P49746 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
THBS3P49746 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THBS3P49746 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.02■□□□□ 0.8
THBS3P49746 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.02■□□□□ 0.8
THBS3P49746 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.02■□□□□ 0.8
THBS3P49746 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
THBS3P49746 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
THBS3P49746 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
THBS3P49746 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
THBS3P49746 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THBS3P49746 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
THBS3P49746 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
THBS3P49746 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.01■□□□□ 0.79
THBS3P49746 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
THBS3P49746 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THBS3P49746 AC092803.2-201ENST00000564287 1899 ntBASIC20.01■□□□□ 0.79
THBS3P49746 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
THBS3P49746 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20■□□□□ 0.79
THBS3P49746 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20■□□□□ 0.79
THBS3P49746 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20■□□□□ 0.79
THBS3P49746 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20■□□□□ 0.79
THBS3P49746 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20■□□□□ 0.79
THBS3P49746 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
THBS3P49746 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
THBS3P49746 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
THBS3P49746 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
THBS3P49746 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
THBS3P49746 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.99■□□□□ 0.79
THBS3P49746 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
THBS3P49746 AC148477.6-201ENST00000623746 465 ntBASIC19.99■□□□□ 0.79
THBS3P49746 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.99■□□□□ 0.79
THBS3P49746 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
THBS3P49746 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
THBS3P49746 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.98■□□□□ 0.79
THBS3P49746 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
THBS3P49746 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
THBS3P49746 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
THBS3P49746 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.98■□□□□ 0.79
THBS3P49746 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.98■□□□□ 0.79
THBS3P49746 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
THBS3P49746 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.98■□□□□ 0.79
THBS3P49746 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
THBS3P49746 DUSP8P4-201ENST00000399538 1761 ntBASIC19.98■□□□□ 0.79
THBS3P49746 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms