Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
ACKR3P25106 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ACKR3P25106 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
ACKR3P25106 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
ACKR3P25106 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.23■□□□□ 0.99
ACKR3P25106 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.23■□□□□ 0.99
ACKR3P25106 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ACKR3P25106 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.22■□□□□ 0.99
ACKR3P25106 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.22■□□□□ 0.99
ACKR3P25106 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ACKR3P25106 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.22■□□□□ 0.99
ACKR3P25106 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ACKR3P25106 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.21■□□□□ 0.99
ACKR3P25106 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ACKR3P25106 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.21■□□□□ 0.99
ACKR3P25106 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
ACKR3P25106 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.2■□□□□ 0.98
ACKR3P25106 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
ACKR3P25106 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ACKR3P25106 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.2■□□□□ 0.98
ACKR3P25106 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACKR3P25106 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.19■□□□□ 0.98
ACKR3P25106 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACKR3P25106 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.19■□□□□ 0.98
ACKR3P25106 AC016575.1-201ENST00000607026 382 ntBASIC21.19■□□□□ 0.98
ACKR3P25106 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACKR3P25106 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ACKR3P25106 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACKR3P25106 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.19■□□□□ 0.98
ACKR3P25106 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ACKR3P25106 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ACKR3P25106 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.18■□□□□ 0.98
ACKR3P25106 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ACKR3P25106 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACKR3P25106 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.17■□□□□ 0.98
ACKR3P25106 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACKR3P25106 AC092803.2-201ENST00000564287 1899 ntBASIC21.17■□□□□ 0.98
ACKR3P25106 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ACKR3P25106 AC145676.1-201ENST00000514988 2004 ntBASIC21.17■□□□□ 0.98
ACKR3P25106 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ACKR3P25106 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACKR3P25106 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACKR3P25106 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACKR3P25106 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACKR3P25106 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACKR3P25106 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACKR3P25106 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ACKR3P25106 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.15■□□□□ 0.98
ACKR3P25106 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
ACKR3P25106 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACKR3P25106 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACKR3P25106 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ACKR3P25106 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ACKR3P25106 AL359258.2-201ENST00000564063 1566 ntBASIC21.14■□□□□ 0.98
ACKR3P25106 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ACKR3P25106 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ACKR3P25106 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.14■□□□□ 0.97
ACKR3P25106 MIR7108-201ENST00000614319 87 ntBASIC21.14■□□□□ 0.97
ACKR3P25106 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ACKR3P25106 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.14■□□□□ 0.97
ACKR3P25106 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ACKR3P25106 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
ACKR3P25106 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ACKR3P25106 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ACKR3P25106 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.13■□□□□ 0.97
ACKR3P25106 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ACKR3P25106 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACKR3P25106 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
ACKR3P25106 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACKR3P25106 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.13■□□□□ 0.97
ACKR3P25106 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACKR3P25106 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ACKR3P25106 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
ACKR3P25106 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ACKR3P25106 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ACKR3P25106 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ACKR3P25106 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ACKR3P25106 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ACKR3P25106 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.11■□□□□ 0.97
ACKR3P25106 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.11■□□□□ 0.97
ACKR3P25106 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ACKR3P25106 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.11■□□□□ 0.97
ACKR3P25106 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ACKR3P25106 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
ACKR3P25106 DUSP8P4-201ENST00000399538 1761 ntBASIC21.1■□□□□ 0.97
ACKR3P25106 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ACKR3P25106 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ACKR3P25106 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ACKR3P25106 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ACKR3P25106 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ACKR3P25106 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ACKR3P25106 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ACKR3P25106 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ACKR3P25106 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ACKR3P25106 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ACKR3P25106 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ACKR3P25106 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ACKR3P25106 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.09■□□□□ 0.97
ACKR3P25106 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ACKR3P25106 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms