Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 SLC2A14-204ENST00000535266 533 ntTSL 514.29□□□□□ -0.122e-6■■■■□ 19.7
SFPQP23246 ZNF331-204ENST00000502248 670 ntTSL 1 (best)12.17□□□□□ -0.462e-6■■■■□ 19.7
SFPQP23246 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.892e-6■■■■□ 19.7
SFPQP23246 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.962e-6■■■■□ 19.7
SFPQP23246 ZNF331-222ENST00000514374 574 ntTSL 48.98□□□□□ -0.972e-6■■■■□ 19.7
SFPQP23246 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.449e-7■■■■□ 19.6
SFPQP23246 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.739e-7■■■■□ 19.6
SFPQP23246 TRIB3-203ENST00000449710 1070 ntTSL 519.19■□□□□ 0.669e-7■■■■□ 19.6
SFPQP23246 TRIB3-204ENST00000615226 877 ntTSL 35.7□□□□□ -1.59e-7■■■■□ 19.6
SFPQP23246 PTPRG-207ENST00000495879 3011 ntTSL 1 (best)21.73■■□□□ 1.071e-6■■■■□ 19.6
SFPQP23246 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.436e-7■■■■□ 19.6
SFPQP23246 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC22.86■■□□□ 1.256e-7■■■■□ 19.6
SFPQP23246 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.44■■□□□ 1.186e-7■■■■□ 19.6
SFPQP23246 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.6■■□□□ 1.695e-7■■■■□ 19.6
SFPQP23246 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.355e-7■■■■□ 19.6
SFPQP23246 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.145e-7■■■■□ 19.6
SFPQP23246 SH3PXD2A-204ENST00000420222 3251 ntTSL 217.46■□□□□ 0.396e-7■■■■□ 19.6
SFPQP23246 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.016e-7■■■■□ 19.6
SFPQP23246 SH3PXD2A-201ENST00000315994 5504 ntTSL 1 (best)14.78□□□□□ -0.046e-7■■■■□ 19.6
SFPQP23246 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.866e-7■■■■□ 19.6
SFPQP23246 PKM-205ENST00000561609 1568 ntTSL 1 (best)12.48□□□□□ -0.411e-7■■■■□ 19.6
SFPQP23246 SND1-209ENST00000470723 568 ntTSL 413.91□□□□□ -0.184e-7■■■■□ 19.6
SFPQP23246 SND1-213ENST00000486037 695 ntTSL 310.96□□□□□ -0.654e-7■■■■□ 19.6
SFPQP23246 SND1-211ENST00000484767 460 ntTSL 410.65□□□□□ -0.74e-7■■■■□ 19.6
SFPQP23246 SH3BP4-204ENST00000416021 593 ntTSL 323.48■■□□□ 1.351e-6■■■■□ 19.5
SFPQP23246 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.81e-6■■■■□ 19.5
SFPQP23246 SPHK1-208ENST00000591651 541 ntTSL 423.21■■□□□ 1.312e-8■■■■□ 19.5
SFPQP23246 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.97■■□□□ 1.272e-8■■■■□ 19.5
SFPQP23246 SPHK1-205ENST00000588682 858 ntTSL 321.06■□□□□ 0.962e-8■■■■□ 19.5
SFPQP23246 SPHK1-209ENST00000591762 2502 ntTSL 220.35■□□□□ 0.852e-8■■■■□ 19.5
SFPQP23246 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.273e-6■■■■□ 19.5
SFPQP23246 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.23e-6■■■■□ 19.5
SFPQP23246 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.163e-6■■■■□ 19.5
SFPQP23246 POM121-204ENST00000446813 3456 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.563e-6■■■■□ 19.5
SFPQP23246 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.89■■□□□ 1.733e-6■■■■□ 19.5
SFPQP23246 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.89■■□□□ 1.733e-6■■■■□ 19.5
SFPQP23246 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.193e-6■■■■□ 19.5
SFPQP23246 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.85■■□□□ 1.093e-6■■■■□ 19.5
SFPQP23246 MGAT5-203ENST00000468758 816 ntTSL 527.64■■■□□ 2.022e-6■■■■□ 19.4
SFPQP23246 MGAT5-204ENST00000481801 651 ntTSL 327.64■■■□□ 2.022e-6■■■■□ 19.4
SFPQP23246 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.832e-6■■■■□ 19.4
SFPQP23246 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.547e-7■■■■□ 19.4
SFPQP23246 CSNK1G2-209ENST00000591752 648 ntTSL 518.98■□□□□ 0.637e-7■■■■□ 19.4
SFPQP23246 NEK6-209ENST00000444973 790 ntTSL 531.76■■■□□ 2.672e-6■■■■□ 19.3
SFPQP23246 NEK6-211ENST00000454453 732 ntTSL 328.71■■■□□ 2.192e-6■■■■□ 19.3
SFPQP23246 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.632e-6■■■■□ 19.3
SFPQP23246 NEK6-213ENST00000540326 2578 ntTSL 1 (best) BASIC14.38□□□□□ -0.112e-6■■■■□ 19.3
SFPQP23246 NEK6-203ENST00000373600 3619 ntTSL 1 (best) BASIC13.59□□□□□ -0.232e-6■■■■□ 19.3
SFPQP23246 NEK6-201ENST00000320246 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.292e-6■■■■□ 19.3
SFPQP23246 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.692e-6■■■■□ 19.3
SFPQP23246 AGAP1-208ENST00000448025 757 ntTSL 510.23□□□□□ -0.773e-6■■■■□ 19.3
SFPQP23246 AGAP1-206ENST00000418654 826 ntTSL 310.16□□□□□ -0.783e-6■■■■□ 19.3
SFPQP23246 NACC1-203ENST00000586171 534 ntTSL 519.24■□□□□ 0.674e-6■■■■□ 19.3
SFPQP23246 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.434e-6■■■■□ 19.3
SFPQP23246 USP7-215ENST00000566273 577 ntTSL 413.03□□□□□ -0.325e-7■■■□□ 19.2
SFPQP23246 NOL4L-208ENST00000475781 1127 ntTSL 518.6■□□□□ 0.572e-6■■■□□ 19.2
SFPQP23246 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC14.21□□□□□ -0.132e-6■■■□□ 19.2
SFPQP23246 ZNF292-208ENST00000518845 277 ntTSL 323.2■■□□□ 1.34e-6■■■□□ 19.2
SFPQP23246 ZNF292-207ENST00000496806 770 ntTSL 315.91■□□□□ 0.144e-6■■■□□ 19.2
SFPQP23246 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.014e-6■■■□□ 19.2
SFPQP23246 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.62□□□□□ -1.194e-6■■■□□ 19.2
SFPQP23246 BCAR1-214ENST00000563700 576 ntTSL 416.11■□□□□ 0.176e-8■■■□□ 19.2
SFPQP23246 BCAR1-219ENST00000567215 581 ntTSL 415.39■□□□□ 0.056e-8■■■□□ 19.2
SFPQP23246 AC009078.3-201ENST00000624205 4084 ntBASIC12.75□□□□□ -0.376e-8■■■□□ 19.2
SFPQP23246 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.183e-6■■■□□ 19.2
SFPQP23246 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.131e-7■■■□□ 19.1
SFPQP23246 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.316e-7■■■□□ 19.1
SFPQP23246 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC15.33■□□□□ 0.046e-7■■■□□ 19.1
SFPQP23246 BCAR1-217ENST00000566465 547 ntTSL 417.17■□□□□ 0.347e-8■■■□□ 19.1
SFPQP23246 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.996e-6■■■□□ 19.1
SFPQP23246 MINOS1-202ENST00000462646 335 ntTSL 321.12■□□□□ 0.976e-6■■■□□ 19.1
SFPQP23246 MINOS1-NBL1-202ENST00000602384 999 ntTSL 520.01■□□□□ 0.796e-6■■■□□ 19.1
SFPQP23246 MINOS1-NBL1-203ENST00000602450 590 ntTSL 219.53■□□□□ 0.726e-6■■■□□ 19.1
SFPQP23246 MINOS1-NBL1-201ENST00000602293 820 ntTSL 316.47■□□□□ 0.236e-6■■■□□ 19.1
SFPQP23246 MINOS1-209ENST00000498642 669 ntTSL 216.38■□□□□ 0.216e-6■■■□□ 19.1
SFPQP23246 MINOS1-203ENST00000467029 583 ntTSL 215.91■□□□□ 0.146e-6■■■□□ 19.1
SFPQP23246 MINOS1-205ENST00000481464 657 ntTSL 315.4■□□□□ 0.066e-6■■■□□ 19.1
SFPQP23246 MINOS1-207ENST00000486890 677 ntTSL 313.63□□□□□ -0.236e-6■■■□□ 19.1
SFPQP23246 MINOS1-201ENST00000322753 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.416e-6■■■□□ 19.1
SFPQP23246 MINOS1-210ENST00000617872 3678 ntTSL 2 BASIC12.49□□□□□ -0.416e-6■■■□□ 19.1
SFPQP23246 CHN2-216ENST00000446446 542 ntTSL 48.11□□□□□ -1.116e-6■■■□□ 19.1
SFPQP23246 MINOS1-206ENST00000485362 438 ntTSL 26.16□□□□□ -1.426e-6■■■□□ 19.1
SFPQP23246 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.04■■□□□ 1.441e-9■■■□□ 19
SFPQP23246 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.72■□□□□ 0.751e-9■■■□□ 19
SFPQP23246 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.521e-9■■■□□ 19
SFPQP23246 ZMYND11-211ENST00000439456 762 ntTSL 416.03■□□□□ 0.161e-9■■■□□ 19
SFPQP23246 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.091e-9■■■□□ 19
SFPQP23246 ZMYND11-201ENST00000309776 4228 ntTSL 2 BASIC13.73□□□□□ -0.211e-9■■■□□ 19
SFPQP23246 ZMYND11-205ENST00000381607 3898 ntTSL 1 (best) BASIC13.09□□□□□ -0.311e-9■■■□□ 19
SFPQP23246 ZMYND11-207ENST00000397959 4138 ntTSL 2 BASIC12.21□□□□□ -0.451e-9■■■□□ 19
SFPQP23246 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.681e-9■■■□□ 19
SFPQP23246 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.9□□□□□ -1.151e-9■■■□□ 19
SFPQP23246 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.63□□□□□ -1.511e-9■■■□□ 19
SFPQP23246 FAM60A-208ENST00000543615 669 ntTSL 520.24■□□□□ 0.831e-6■■■□□ 19
SFPQP23246 RXRA-203ENST00000484822 5215 ntTSL 217.77■□□□□ 0.443e-6■■■□□ 18.9
SFPQP23246 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.433e-6■■■□□ 18.9
SFPQP23246 AC087222.1-201ENST00000571113 504 ntBASIC13.18□□□□□ -0.34e-6■■■□□ 18.9
SFPQP23246 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.58e-7■■■□□ 18.7
SFPQP23246 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.78e-7■■■□□ 18.7
SFPQP23246 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.838e-7■■■□□ 18.7
Retrieved 100 of 4,991 protein–RNA pairs in 316.9 ms