Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.11■□□□□ 0.97
SFTPBP07988 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SFTPBP07988 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SFTPBP07988 MIR4449-201ENST00000578365 66 ntBASIC21.11■□□□□ 0.97
SFTPBP07988 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SFTPBP07988 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.11■□□□□ 0.97
SFTPBP07988 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.1■□□□□ 0.97
SFTPBP07988 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SFTPBP07988 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SFTPBP07988 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SFTPBP07988 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.1■□□□□ 0.97
SFTPBP07988 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.09■□□□□ 0.97
SFTPBP07988 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SFTPBP07988 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SFTPBP07988 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SFTPBP07988 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
SFTPBP07988 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.09■□□□□ 0.97
SFTPBP07988 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.09■□□□□ 0.97
SFTPBP07988 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SFTPBP07988 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.08■□□□□ 0.97
SFTPBP07988 AP004609.3-201ENST00000610705 1884 ntBASIC21.08■□□□□ 0.97
SFTPBP07988 AC091060.1-201ENST00000623524 1766 ntBASIC21.08■□□□□ 0.96
SFTPBP07988 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SFTPBP07988 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SFTPBP07988 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SFTPBP07988 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SFTPBP07988 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SFTPBP07988 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SFTPBP07988 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.05■□□□□ 0.96
SFTPBP07988 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SFTPBP07988 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SFTPBP07988 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SFTPBP07988 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SFTPBP07988 WHAMMP3-201ENST00000611636 1609 ntBASIC21.04■□□□□ 0.96
SFTPBP07988 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SFTPBP07988 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.03■□□□□ 0.96
SFTPBP07988 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SFTPBP07988 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SFTPBP07988 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SFTPBP07988 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.02■□□□□ 0.96
SFTPBP07988 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.02■□□□□ 0.96
SFTPBP07988 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
SFTPBP07988 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SFTPBP07988 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SFTPBP07988 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SFTPBP07988 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SFTPBP07988 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SFTPBP07988 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21■□□□□ 0.95
SFTPBP07988 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SFTPBP07988 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SFTPBP07988 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.99■□□□□ 0.95
SFTPBP07988 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.99■□□□□ 0.95
SFTPBP07988 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SFTPBP07988 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.99■□□□□ 0.95
SFTPBP07988 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SFTPBP07988 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SFTPBP07988 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.98■□□□□ 0.95
SFTPBP07988 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SFTPBP07988 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SFTPBP07988 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SFTPBP07988 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.98■□□□□ 0.95
SFTPBP07988 AC142472.1-201ENST00000612013 1741 ntBASIC20.98■□□□□ 0.95
SFTPBP07988 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SFTPBP07988 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SFTPBP07988 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SFTPBP07988 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SFTPBP07988 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SFTPBP07988 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SFTPBP07988 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.97■□□□□ 0.95
SFTPBP07988 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SFTPBP07988 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.96■□□□□ 0.95
SFTPBP07988 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SFTPBP07988 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SFTPBP07988 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SFTPBP07988 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.96■□□□□ 0.95
SFTPBP07988 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SFTPBP07988 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SFTPBP07988 AC145676.1-201ENST00000514988 2004 ntBASIC20.95■□□□□ 0.94
SFTPBP07988 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.95■□□□□ 0.94
SFTPBP07988 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.95■□□□□ 0.94
SFTPBP07988 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SFTPBP07988 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SFTPBP07988 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SFTPBP07988 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SFTPBP07988 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SFTPBP07988 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SFTPBP07988 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SFTPBP07988 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.94■□□□□ 0.94
SFTPBP07988 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SFTPBP07988 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SFTPBP07988 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.93■□□□□ 0.94
SFTPBP07988 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SFTPBP07988 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SFTPBP07988 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SFTPBP07988 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.93■□□□□ 0.94
SFTPBP07988 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SFTPBP07988 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SFTPBP07988 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SFTPBP07988 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SFTPBP07988 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms