Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
HLA-DRAP01903 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
HLA-DRAP01903 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
HLA-DRAP01903 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.52■■□□□ 1.84
HLA-DRAP01903 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.84
HLA-DRAP01903 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.51■■□□□ 1.83
HLA-DRAP01903 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
HLA-DRAP01903 GPX1-201ENST00000419349 1106 ntBASIC26.51■■□□□ 1.83
HLA-DRAP01903 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.51■■□□□ 1.83
HLA-DRAP01903 AC092296.2-201ENST00000589470 999 ntBASIC26.51■■□□□ 1.83
HLA-DRAP01903 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
HLA-DRAP01903 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
HLA-DRAP01903 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
HLA-DRAP01903 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
HLA-DRAP01903 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
HLA-DRAP01903 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
HLA-DRAP01903 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.49■■□□□ 1.83
HLA-DRAP01903 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
HLA-DRAP01903 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
HLA-DRAP01903 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
HLA-DRAP01903 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
HLA-DRAP01903 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.48■■□□□ 1.83
HLA-DRAP01903 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
HLA-DRAP01903 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
HLA-DRAP01903 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
HLA-DRAP01903 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
HLA-DRAP01903 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
HLA-DRAP01903 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
HLA-DRAP01903 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.46■■□□□ 1.83
HLA-DRAP01903 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
HLA-DRAP01903 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
HLA-DRAP01903 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.46■■□□□ 1.83
HLA-DRAP01903 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
HLA-DRAP01903 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
HLA-DRAP01903 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
HLA-DRAP01903 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.45■■□□□ 1.83
HLA-DRAP01903 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.45■■□□□ 1.82
HLA-DRAP01903 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
HLA-DRAP01903 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
HLA-DRAP01903 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.45■■□□□ 1.82
HLA-DRAP01903 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
HLA-DRAP01903 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
HLA-DRAP01903 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
HLA-DRAP01903 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
HLA-DRAP01903 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.44■■□□□ 1.82
HLA-DRAP01903 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.44■■□□□ 1.82
HLA-DRAP01903 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
HLA-DRAP01903 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.43■■□□□ 1.82
HLA-DRAP01903 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
HLA-DRAP01903 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
HLA-DRAP01903 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
HLA-DRAP01903 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
HLA-DRAP01903 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.42■■□□□ 1.82
HLA-DRAP01903 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
HLA-DRAP01903 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
HLA-DRAP01903 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
HLA-DRAP01903 ECEL1P2-201ENST00000461596 1295 ntBASIC26.41■■□□□ 1.82
HLA-DRAP01903 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.41■■□□□ 1.82
HLA-DRAP01903 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.41■■□□□ 1.82
HLA-DRAP01903 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.41■■□□□ 1.82
HLA-DRAP01903 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
HLA-DRAP01903 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
HLA-DRAP01903 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
HLA-DRAP01903 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
HLA-DRAP01903 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
HLA-DRAP01903 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
HLA-DRAP01903 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
HLA-DRAP01903 AC025884.2-201ENST00000553429 711 ntBASIC26.39■■□□□ 1.82
HLA-DRAP01903 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
HLA-DRAP01903 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.39■■□□□ 1.81
HLA-DRAP01903 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.39■■□□□ 1.81
HLA-DRAP01903 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.39■■□□□ 1.81
HLA-DRAP01903 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
HLA-DRAP01903 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.38■■□□□ 1.81
HLA-DRAP01903 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.38■■□□□ 1.81
HLA-DRAP01903 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
HLA-DRAP01903 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
HLA-DRAP01903 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.37■■□□□ 1.81
HLA-DRAP01903 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.37■■□□□ 1.81
HLA-DRAP01903 HSD17B1P1-201ENST00000590052 955 ntBASIC26.37■■□□□ 1.81
HLA-DRAP01903 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
HLA-DRAP01903 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
HLA-DRAP01903 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.37■■□□□ 1.81
HLA-DRAP01903 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.36■■□□□ 1.81
HLA-DRAP01903 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HLA-DRAP01903 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
HLA-DRAP01903 SMPD5-203ENST00000639008 1464 ntBASIC26.36■■□□□ 1.81
HLA-DRAP01903 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
HLA-DRAP01903 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.36■■□□□ 1.81
HLA-DRAP01903 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.35■■□□□ 1.81
HLA-DRAP01903 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.35■■□□□ 1.81
HLA-DRAP01903 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.35■■□□□ 1.81
HLA-DRAP01903 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
HLA-DRAP01903 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
HLA-DRAP01903 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.34■■□□□ 1.81
HLA-DRAP01903 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
HLA-DRAP01903 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
HLA-DRAP01903 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
HLA-DRAP01903 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
HLA-DRAP01903 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.34■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms