Protein–RNA interactions for Protein: O60896

RAMP3, Receptor activity-modifying protein 3, humanhuman

Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAMP3O60896 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAMP3O60896 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAMP3O60896 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAMP3O60896 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.02■□□□□ 0.8
RAMP3O60896 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.02■□□□□ 0.8
RAMP3O60896 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAMP3O60896 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
RAMP3O60896 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RAMP3O60896 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAMP3O60896 LINC01971-201ENST00000617888 1048 ntBASIC20.01■□□□□ 0.79
RAMP3O60896 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAMP3O60896 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RAMP3O60896 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAMP3O60896 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RAMP3O60896 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
RAMP3O60896 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAMP3O60896 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAMP3O60896 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAMP3O60896 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAMP3O60896 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.99■□□□□ 0.79
RAMP3O60896 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.99■□□□□ 0.79
RAMP3O60896 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
RAMP3O60896 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAMP3O60896 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAMP3O60896 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.98■□□□□ 0.79
RAMP3O60896 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.98■□□□□ 0.79
RAMP3O60896 MIR3648-2-201ENST00000581792 180 ntBASIC19.98■□□□□ 0.79
RAMP3O60896 MIR3648-1-201ENST00000615959 180 ntBASIC19.98■□□□□ 0.79
RAMP3O60896 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.98■□□□□ 0.79
RAMP3O60896 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
RAMP3O60896 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAMP3O60896 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAMP3O60896 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAMP3O60896 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAMP3O60896 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAMP3O60896 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAMP3O60896 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAMP3O60896 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAMP3O60896 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAMP3O60896 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAMP3O60896 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RAMP3O60896 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAMP3O60896 DUX4L11-201ENST00000611504 1267 ntBASIC19.96■□□□□ 0.79
RAMP3O60896 DUX4L12-201ENST00000614593 1267 ntBASIC19.96■□□□□ 0.79
RAMP3O60896 DUX4L14-201ENST00000621227 1267 ntBASIC19.96■□□□□ 0.79
RAMP3O60896 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RAMP3O60896 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.96■□□□□ 0.79
RAMP3O60896 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAMP3O60896 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAMP3O60896 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAMP3O60896 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RAMP3O60896 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAMP3O60896 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAMP3O60896 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.95■□□□□ 0.78
RAMP3O60896 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAMP3O60896 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RAMP3O60896 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAMP3O60896 AC016575.1-201ENST00000607026 382 ntBASIC19.95■□□□□ 0.78
RAMP3O60896 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAMP3O60896 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RAMP3O60896 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RAMP3O60896 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.94■□□□□ 0.78
RAMP3O60896 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.94■□□□□ 0.78
RAMP3O60896 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAMP3O60896 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAMP3O60896 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAMP3O60896 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAMP3O60896 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAMP3O60896 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAMP3O60896 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAMP3O60896 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAMP3O60896 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAMP3O60896 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAMP3O60896 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAMP3O60896 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAMP3O60896 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAMP3O60896 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAMP3O60896 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAMP3O60896 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.92■□□□□ 0.78
RAMP3O60896 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAMP3O60896 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAMP3O60896 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAMP3O60896 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAMP3O60896 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAMP3O60896 ERN1-208ENST00000606895 2068 ntBASIC19.91■□□□□ 0.78
RAMP3O60896 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAMP3O60896 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
RAMP3O60896 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RAMP3O60896 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAMP3O60896 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.91■□□□□ 0.78
RAMP3O60896 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAMP3O60896 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RAMP3O60896 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.91■□□□□ 0.78
RAMP3O60896 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAMP3O60896 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.91■□□□□ 0.78
RAMP3O60896 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
RAMP3O60896 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAMP3O60896 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAMP3O60896 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.9■□□□□ 0.78
RAMP3O60896 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms