Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.37■■□□□ 1.33
URB1O60287 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
URB1O60287 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.36■■□□□ 1.33
URB1O60287 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
URB1O60287 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
URB1O60287 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.35■■□□□ 1.33
URB1O60287 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
URB1O60287 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC23.34■■□□□ 1.33
URB1O60287 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.34■■□□□ 1.33
URB1O60287 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
URB1O60287 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
URB1O60287 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
URB1O60287 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
URB1O60287 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.33■■□□□ 1.32
URB1O60287 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
URB1O60287 KRT125P-201ENST00000546827 989 ntBASIC23.32■■□□□ 1.32
URB1O60287 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.32■■□□□ 1.32
URB1O60287 MIR3960-201ENST00000583311 91 ntBASIC23.31■■□□□ 1.32
URB1O60287 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
URB1O60287 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
URB1O60287 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
URB1O60287 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.3■■□□□ 1.32
URB1O60287 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
URB1O60287 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
URB1O60287 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.3■■□□□ 1.32
URB1O60287 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
URB1O60287 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.3■■□□□ 1.32
URB1O60287 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
URB1O60287 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
URB1O60287 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
URB1O60287 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
URB1O60287 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
URB1O60287 MIR4787-201ENST00000607364 84 ntBASIC23.29■■□□□ 1.32
URB1O60287 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.29■■□□□ 1.32
URB1O60287 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
URB1O60287 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
URB1O60287 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.29■■□□□ 1.32
URB1O60287 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
URB1O60287 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.28■■□□□ 1.32
URB1O60287 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.28■■□□□ 1.32
URB1O60287 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.27■■□□□ 1.32
URB1O60287 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.27■■□□□ 1.32
URB1O60287 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
URB1O60287 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
URB1O60287 AC019171.1-201ENST00000601251 1056 ntBASIC23.26■■□□□ 1.31
URB1O60287 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.26■■□□□ 1.31
URB1O60287 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
URB1O60287 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
URB1O60287 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.25■■□□□ 1.31
URB1O60287 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.25■■□□□ 1.31
URB1O60287 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.25■■□□□ 1.31
URB1O60287 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
URB1O60287 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
URB1O60287 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.24■■□□□ 1.31
URB1O60287 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
URB1O60287 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.24■■□□□ 1.31
URB1O60287 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
URB1O60287 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
URB1O60287 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.23■■□□□ 1.31
URB1O60287 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
URB1O60287 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.23■■□□□ 1.31
URB1O60287 AL139246.5-201ENST00000606645 996 ntBASIC23.23■■□□□ 1.31
URB1O60287 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
URB1O60287 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.23■■□□□ 1.31
URB1O60287 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
URB1O60287 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
URB1O60287 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.22■■□□□ 1.31
URB1O60287 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.22■■□□□ 1.31
URB1O60287 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
URB1O60287 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
URB1O60287 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.22■■□□□ 1.31
URB1O60287 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
URB1O60287 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.22■■□□□ 1.31
URB1O60287 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
URB1O60287 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
URB1O60287 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
URB1O60287 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
URB1O60287 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
URB1O60287 AC131281.2-201ENST00000520478 145 ntBASIC23.21■■□□□ 1.31
URB1O60287 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
URB1O60287 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
URB1O60287 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
URB1O60287 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
URB1O60287 UNC93B8-201ENST00000511903 705 ntBASIC23.2■■□□□ 1.3
URB1O60287 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
URB1O60287 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
URB1O60287 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
URB1O60287 BX664725.1-201ENST00000438252 379 ntBASIC23.2■■□□□ 1.3
URB1O60287 KRT16P3-201ENST00000439127 1283 ntBASIC23.2■■□□□ 1.3
URB1O60287 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.2■■□□□ 1.3
URB1O60287 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
URB1O60287 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
URB1O60287 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
URB1O60287 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
URB1O60287 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
URB1O60287 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
URB1O60287 LONRF2P2-201ENST00000439212 571 ntBASIC23.18■■□□□ 1.3
URB1O60287 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
URB1O60287 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
URB1O60287 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms