Protein–RNA interactions for Protein: O43676

NDUFB3, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3O43676 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDUFB3O43676 AL359504.2-201ENST00000605506 1601 ntBASIC20.45■□□□□ 0.87
NDUFB3O43676 AP004609.3-201ENST00000610705 1884 ntBASIC20.45■□□□□ 0.86
NDUFB3O43676 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDUFB3O43676 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFB3O43676 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFB3O43676 SMPD5-203ENST00000639008 1464 ntBASIC20.44■□□□□ 0.86
NDUFB3O43676 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFB3O43676 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFB3O43676 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFB3O43676 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFB3O43676 AC142472.1-201ENST00000612013 1741 ntBASIC20.44■□□□□ 0.86
NDUFB3O43676 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.44■□□□□ 0.86
NDUFB3O43676 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDUFB3O43676 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDUFB3O43676 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.43■□□□□ 0.86
NDUFB3O43676 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NDUFB3O43676 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.43■□□□□ 0.86
NDUFB3O43676 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDUFB3O43676 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NDUFB3O43676 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.43■□□□□ 0.86
NDUFB3O43676 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDUFB3O43676 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.42■□□□□ 0.86
NDUFB3O43676 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NDUFB3O43676 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NDUFB3O43676 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NDUFB3O43676 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NDUFB3O43676 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NDUFB3O43676 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NDUFB3O43676 RARRES2P2-201ENST00000394842 485 ntBASIC20.41■□□□□ 0.86
NDUFB3O43676 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NDUFB3O43676 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NDUFB3O43676 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NDUFB3O43676 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NDUFB3O43676 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.4■□□□□ 0.86
NDUFB3O43676 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NDUFB3O43676 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NDUFB3O43676 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NDUFB3O43676 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.39■□□□□ 0.85
NDUFB3O43676 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.39■□□□□ 0.85
NDUFB3O43676 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.39■□□□□ 0.85
NDUFB3O43676 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NDUFB3O43676 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NDUFB3O43676 AC025884.2-201ENST00000553429 711 ntBASIC20.38■□□□□ 0.85
NDUFB3O43676 MIR3960-201ENST00000583311 91 ntBASIC20.38■□□□□ 0.85
NDUFB3O43676 AL121749.1-202ENST00000609313 2153 ntBASIC20.38■□□□□ 0.85
NDUFB3O43676 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NDUFB3O43676 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.37■□□□□ 0.85
NDUFB3O43676 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.37■□□□□ 0.85
NDUFB3O43676 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.37■□□□□ 0.85
NDUFB3O43676 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NDUFB3O43676 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.37■□□□□ 0.85
NDUFB3O43676 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NDUFB3O43676 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NDUFB3O43676 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NDUFB3O43676 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NDUFB3O43676 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NDUFB3O43676 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
NDUFB3O43676 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NDUFB3O43676 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFB3O43676 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
NDUFB3O43676 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFB3O43676 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFB3O43676 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.35■□□□□ 0.85
NDUFB3O43676 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.35■□□□□ 0.85
NDUFB3O43676 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.34■□□□□ 0.85
NDUFB3O43676 AC007029.1-201ENST00000604183 313 ntBASIC20.34■□□□□ 0.85
NDUFB3O43676 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFB3O43676 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
NDUFB3O43676 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFB3O43676 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
NDUFB3O43676 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFB3O43676 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
NDUFB3O43676 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.34■□□□□ 0.85
NDUFB3O43676 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
NDUFB3O43676 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
NDUFB3O43676 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NDUFB3O43676 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NDUFB3O43676 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NDUFB3O43676 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NDUFB3O43676 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
NDUFB3O43676 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NDUFB3O43676 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
NDUFB3O43676 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NDUFB3O43676 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NDUFB3O43676 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.33■□□□□ 0.84
NDUFB3O43676 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NDUFB3O43676 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.33■□□□□ 0.84
NDUFB3O43676 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
NDUFB3O43676 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.32■□□□□ 0.84
NDUFB3O43676 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFB3O43676 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFB3O43676 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFB3O43676 RP9P-202ENST00000450133 1212 ntBASIC20.32■□□□□ 0.84
NDUFB3O43676 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFB3O43676 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.31■□□□□ 0.84
NDUFB3O43676 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFB3O43676 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.3■□□□□ 0.84
NDUFB3O43676 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFB3O43676 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms