Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 AC011530.1-203ENST00000597712 432 ntTSL 217.53■□□□□ 0.49e-8■■■■□ 20.7
NKRFO15226 AC011530.1-202ENST00000596586 397 ntAPPRIS P5 TSL 216.03■□□□□ 0.169e-8■■■■□ 20.7
NKRFO15226 AC011530.1-204ENST00000595946 321 ntAPPRIS ALT2 TSL 216.03■□□□□ 0.169e-8■■■■□ 20.7
NKRFO15226 CTDSPL-204ENST00000435525 371 ntTSL 318.78■□□□□ 0.63e-7■■■■□ 20.6
NKRFO15226 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.023e-7■■■■□ 20.6
NKRFO15226 UTRN-208ENST00000433557 354 ntTSL 425.18■■□□□ 1.624e-9■■■■□ 20.6
NKRFO15226 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.332e-11■■■■□ 20.6
NKRFO15226 UTRN-213ENST00000628146 597 ntTSL 25.14□□□□□ -1.594e-9■■■■□ 20.6
NKRFO15226 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.734e-9■■■■□ 20.6
NKRFO15226 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.2■■□□□ 1.33e-6■■■■□ 20.6
NKRFO15226 MTHFD1L-202ENST00000367308 996 ntTSL 520.15■□□□□ 0.823e-6■■■■□ 20.6
NKRFO15226 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.663e-6■■■■□ 20.6
NKRFO15226 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.473e-6■■■■□ 20.6
NKRFO15226 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC14.1□□□□□ -0.151e-6■■■■□ 20.5
NKRFO15226 AGO2-209ENST00000523609 3050 ntTSL 1 (best)13.05□□□□□ -0.321e-6■■■■□ 20.5
NKRFO15226 AGO2-202ENST00000517293 422 ntTSL 37.82□□□□□ -1.161e-6■■■■□ 20.5
NKRFO15226 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.461e-6■■■■□ 20.5
NKRFO15226 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.353e-8■■■■□ 20.5
NKRFO15226 ZNF839-207ENST00000559098 2865 ntTSL 217.48■□□□□ 0.392e-10■■■■□ 20.4
NKRFO15226 JMJD1C-211ENST00000633035 499 ntTSL 319.16■□□□□ 0.664e-7■■■■□ 20.4
NKRFO15226 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.66■■■□□ 2.344e-6■■■■□ 20.4
NKRFO15226 MEX3D-202ENST00000605173 2132 ntAPPRIS ALT2 TSL 1 (best)22.52■■□□□ 1.24e-6■■■■□ 20.4
NKRFO15226 GPRC5C-211ENST00000582873 393 ntTSL 327.66■■■□□ 2.021e-6■■■■□ 20.4
NKRFO15226 GPRC5C-208ENST00000581590 1554 ntAPPRIS ALT2 TSL 523.3■■□□□ 1.321e-6■■■■□ 20.4
NKRFO15226 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.181e-6■■■■□ 20.4
NKRFO15226 GPRC5C-206ENST00000482723 2317 ntTSL 218.95■□□□□ 0.621e-6■■■■□ 20.4
NKRFO15226 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.343e-6■■■■□ 20.4
NKRFO15226 SUN1-202ENST00000389574 3812 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.579e-7■■■■□ 20.3
NKRFO15226 SUN1-219ENST00000452783 3717 ntTSL 2 BASIC9.57□□□□□ -0.889e-7■■■■□ 20.3
NKRFO15226 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.36■■■□□ 2.451e-6■■■■□ 20.3
NKRFO15226 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.31e-6■■■■□ 20.3
NKRFO15226 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.621e-6■■■■□ 20.3
NKRFO15226 XPO6-209ENST00000566073 715 ntTSL 524.25■■□□□ 1.471e-9■■■■□ 20.3
NKRFO15226 EHBP1L1-205ENST00000529099 490 ntTSL 523.66■■□□□ 1.387e-14■■■■□ 20.3
NKRFO15226 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.37e-14■■■■□ 20.3
NKRFO15226 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.07■■□□□ 1.121e-9■■■■□ 20.3
NKRFO15226 TNRC6B-204ENST00000441751 415 ntTSL 518.02■□□□□ 0.485e-8■■■■□ 20.3
NKRFO15226 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.461e-9■■■■□ 20.3
NKRFO15226 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.191e-9■■■■□ 20.3
NKRFO15226 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC14.94□□□□□ -0.021e-9■■■■□ 20.3
NKRFO15226 SUN2-202ENST00000405510 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.291e-9■■■■□ 20.3
NKRFO15226 XPO6-208ENST00000565698 4255 ntTSL 2 BASIC12.4□□□□□ -0.421e-9■■■■□ 20.3
NKRFO15226 XPO6-216ENST00000569951 262 ntTSL 511.55□□□□□ -0.561e-9■■■■□ 20.3
NKRFO15226 RUFY3-206ENST00000503876 531 ntTSL 48.31□□□□□ -1.081e-9■■■■□ 20.3
NKRFO15226 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.555e-8■■■■□ 20.3
NKRFO15226 GAK-209ENST00000507580 468 ntTSL 424.52■■□□□ 1.522e-6■■■■□ 20.2
NKRFO15226 GAK-219ENST00000512325 577 ntTSL 324.52■■□□□ 1.522e-6■■■■□ 20.2
NKRFO15226 GAK-207ENST00000505819 1326 ntTSL 523.83■■□□□ 1.42e-6■■■■□ 20.2
NKRFO15226 GAK-202ENST00000502656 554 ntTSL 422.36■■□□□ 1.172e-6■■■■□ 20.2
NKRFO15226 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.18■□□□□ 0.662e-6■■■■□ 20.2
NKRFO15226 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.042e-6■■■■□ 20.2
NKRFO15226 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.24■□□□□ 0.032e-6■■■■□ 20.2
NKRFO15226 GAK-212ENST00000510022 618 ntTSL 410.65□□□□□ -0.72e-6■■■■□ 20.2
NKRFO15226 GAK-215ENST00000511229 568 ntTSL 36.43□□□□□ -1.382e-6■■■■□ 20.2
NKRFO15226 JDP2-206ENST00000559060 631 ntTSL 330.01■■■□□ 2.395e-6■■■■□ 20.2
NKRFO15226 JDP2-205ENST00000558068 454 ntTSL 330.01■■■□□ 2.395e-6■■■■□ 20.2
NKRFO15226 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.94■■□□□ 1.95e-6■■■■□ 20.2
NKRFO15226 PPM1B-203ENST00000378540 1703 ntTSL 225.68■■□□□ 1.75e-6■■■■□ 20.2
NKRFO15226 PPM1B-208ENST00000419807 2084 ntTSL 524.34■■□□□ 1.495e-6■■■■□ 20.2
NKRFO15226 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.445e-6■■■■□ 20.2
NKRFO15226 IFRD1-209ENST00000445335 570 ntTSL 422.07■■□□□ 1.125e-6■■■■□ 20.2
NKRFO15226 PPM1B-207ENST00000409486 1481 ntTSL 1 (best)21.84■■□□□ 1.095e-6■■■■□ 20.2
NKRFO15226 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.025e-6■■■■□ 20.2
NKRFO15226 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.985e-6■■■■□ 20.2
NKRFO15226 JDP2-207ENST00000559773 558 ntTSL 220.65■□□□□ 0.95e-6■■■■□ 20.2
NKRFO15226 IFRD1-213ENST00000476927 486 ntTSL 319.97■□□□□ 0.795e-6■■■■□ 20.2
NKRFO15226 CLUH-213ENST00000576309 433 ntTSL 319.71■□□□□ 0.755e-6■■■■□ 20.2
NKRFO15226 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.65e-6■■■■□ 20.2
NKRFO15226 ELL-204ENST00000596915 623 ntTSL 318.45■□□□□ 0.543e-7■■■■□ 20.2
NKRFO15226 MAP4-212ENST00000468075 487 ntTSL 517.88■□□□□ 0.455e-6■■■■□ 20.2
NKRFO15226 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.45e-6■■■■□ 20.2
NKRFO15226 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.35e-6■■■■□ 20.2
NKRFO15226 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.295e-6■■■■□ 20.2
NKRFO15226 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.265e-6■■■■□ 20.2
NKRFO15226 CLUH-214ENST00000576885 583 ntTSL 316.57■□□□□ 0.245e-6■■■■□ 20.2
NKRFO15226 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.235e-6■■■■□ 20.2
NKRFO15226 DNHD1-220ENST00000534210 2867 ntTSL 1 (best)16.32■□□□□ 0.25e-6■■■■□ 20.2
NKRFO15226 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.193e-7■■■■□ 20.2
NKRFO15226 CLUH-210ENST00000574426 3844 ntAPPRIS ALT2 TSL 516.19■□□□□ 0.185e-6■■■■□ 20.2
NKRFO15226 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.34■□□□□ 0.055e-6■■■■□ 20.2
NKRFO15226 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.055e-6■■■■□ 20.2
NKRFO15226 ALOX12-AS1-205ENST00000572385 576 ntTSL 415.3■□□□□ 0.045e-6■■■■□ 20.2
NKRFO15226 ELL-202ENST00000594635 4074 ntTSL 1 (best)15.16■□□□□ 0.023e-7■■■■□ 20.2
NKRFO15226 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC15.07■□□□□ 05e-6■■■■□ 20.2
NKRFO15226 CLCN7-205ENST00000563642 4184 ntTSL 214.59□□□□□ -0.075e-6■■■■□ 20.2
NKRFO15226 CLUH-204ENST00000571566 545 ntTSL 414.21□□□□□ -0.135e-6■■■■□ 20.2
NKRFO15226 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.145e-6■■■■□ 20.2
NKRFO15226 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.235e-6■■■■□ 20.2
NKRFO15226 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.41□□□□□ -0.265e-6■■■■□ 20.2
NKRFO15226 ALOX12-AS1-203ENST00000570562 567 ntTSL 3 BASIC13.19□□□□□ -0.35e-6■■■■□ 20.2
NKRFO15226 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.335e-6■■■■□ 20.2
NKRFO15226 ALOX12-AS1-209ENST00000575889 439 ntTSL 3 BASIC12.84□□□□□ -0.355e-6■■■■□ 20.2
NKRFO15226 DNHD1-219ENST00000533649 2557 ntTSL 1 (best)12.69□□□□□ -0.385e-6■■■■□ 20.2
NKRFO15226 AC040977.2-201ENST00000572547 498 ntTSL 3 BASIC12.65□□□□□ -0.385e-6■■■■□ 20.2
NKRFO15226 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC12.56□□□□□ -0.45e-6■■■■□ 20.2
NKRFO15226 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC12.56□□□□□ -0.45e-6■■■■□ 20.2
NKRFO15226 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC12.42□□□□□ -0.425e-6■■■■□ 20.2
NKRFO15226 PCSK9-202ENST00000490692 3891 ntTSL 212.33□□□□□ -0.445e-6■■■■□ 20.2
NKRFO15226 DNHD1-216ENST00000532027 4881 ntTSL 211.9□□□□□ -0.55e-6■■■■□ 20.2
NKRFO15226 JDP2-204ENST00000437176 3775 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.575e-6■■■■□ 20.2
Retrieved 100 of 9,198 protein–RNA pairs in 198.8 ms