Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
ATP2A1O14983 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC28.35■■■□□ 2.13
ATP2A1O14983 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
ATP2A1O14983 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
ATP2A1O14983 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC28.35■■■□□ 2.13
ATP2A1O14983 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC28.34■■■□□ 2.13
ATP2A1O14983 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC28.34■■■□□ 2.13
ATP2A1O14983 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
ATP2A1O14983 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
ATP2A1O14983 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
ATP2A1O14983 MIR6765-201ENST00000614092 87 ntBASIC28.33■■■□□ 2.13
ATP2A1O14983 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
ATP2A1O14983 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
ATP2A1O14983 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ATP2A1O14983 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.32■■■□□ 2.12
ATP2A1O14983 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.32■■■□□ 2.12
ATP2A1O14983 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC28.32■■■□□ 2.12
ATP2A1O14983 AC074183.2-201ENST00000623112 922 ntBASIC28.32■■■□□ 2.12
ATP2A1O14983 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ATP2A1O14983 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
ATP2A1O14983 DRD5P2-201ENST00000421395 2012 ntBASIC28.3■■■□□ 2.12
ATP2A1O14983 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
ATP2A1O14983 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.3■■■□□ 2.12
ATP2A1O14983 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
ATP2A1O14983 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.29■■■□□ 2.12
ATP2A1O14983 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
ATP2A1O14983 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
ATP2A1O14983 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
ATP2A1O14983 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.28■■■□□ 2.12
ATP2A1O14983 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.28■■■□□ 2.12
ATP2A1O14983 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
ATP2A1O14983 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
ATP2A1O14983 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
ATP2A1O14983 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ATP2A1O14983 AC018755.3-202ENST00000596210 929 ntBASIC28.27■■■□□ 2.12
ATP2A1O14983 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC28.27■■■□□ 2.12
ATP2A1O14983 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ATP2A1O14983 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
ATP2A1O14983 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
ATP2A1O14983 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
ATP2A1O14983 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ATP2A1O14983 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.25■■■□□ 2.11
ATP2A1O14983 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ATP2A1O14983 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.25■■■□□ 2.11
ATP2A1O14983 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ATP2A1O14983 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ATP2A1O14983 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ATP2A1O14983 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC28.23■■■□□ 2.11
ATP2A1O14983 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ATP2A1O14983 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC28.23■■■□□ 2.11
ATP2A1O14983 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ATP2A1O14983 AC010980.1-201ENST00000587192 1142 ntBASIC28.22■■■□□ 2.11
ATP2A1O14983 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.22■■■□□ 2.11
ATP2A1O14983 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC28.22■■■□□ 2.11
ATP2A1O14983 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ATP2A1O14983 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ATP2A1O14983 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ATP2A1O14983 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
ATP2A1O14983 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.21■■■□□ 2.11
ATP2A1O14983 BHLHE23-202ENST00000612929 1109 ntBASIC28.21■■■□□ 2.11
ATP2A1O14983 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ATP2A1O14983 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC28.2■■■□□ 2.11
ATP2A1O14983 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
ATP2A1O14983 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
ATP2A1O14983 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC28.2■■■□□ 2.1
ATP2A1O14983 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC28.2■■■□□ 2.1
ATP2A1O14983 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.19■■■□□ 2.1
ATP2A1O14983 HYI-210ENST00000486909 905 ntTSL 5 BASIC28.19■■■□□ 2.1
ATP2A1O14983 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC28.19■■■□□ 2.1
ATP2A1O14983 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ATP2A1O14983 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.19■■■□□ 2.1
ATP2A1O14983 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
ATP2A1O14983 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ATP2A1O14983 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC28.18■■■□□ 2.1
ATP2A1O14983 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.18■■■□□ 2.1
ATP2A1O14983 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC28.18■■■□□ 2.1
ATP2A1O14983 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ATP2A1O14983 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
ATP2A1O14983 AC139795.1-202ENST00000500444 432 ntBASIC28.18■■■□□ 2.1
ATP2A1O14983 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC28.18■■■□□ 2.1
ATP2A1O14983 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
ATP2A1O14983 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ATP2A1O14983 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
ATP2A1O14983 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ATP2A1O14983 LINC01003-201ENST00000564834 1764 ntBASIC28.17■■■□□ 2.1
ATP2A1O14983 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ATP2A1O14983 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ATP2A1O14983 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ATP2A1O14983 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC28.17■■■□□ 2.1
ATP2A1O14983 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.17■■■□□ 2.1
ATP2A1O14983 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
ATP2A1O14983 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
ATP2A1O14983 BEX3-202ENST00000372634 753 ntTSL 2 BASIC28.16■■■□□ 2.1
ATP2A1O14983 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC28.16■■■□□ 2.1
ATP2A1O14983 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.16■■■□□ 2.1
ATP2A1O14983 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
ATP2A1O14983 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
ATP2A1O14983 AC139426.1-201ENST00000568218 2529 ntBASIC28.15■■■□□ 2.1
ATP2A1O14983 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
ATP2A1O14983 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms