Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
TRIM6-TRIM34B2RNG4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
TRIM6-TRIM34B2RNG4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30■■■□□ 2.39
TRIM6-TRIM34B2RNG4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30■■■□□ 2.39
TRIM6-TRIM34B2RNG4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30■■■□□ 2.39
TRIM6-TRIM34B2RNG4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
TRIM6-TRIM34B2RNG4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30■■■□□ 2.39
TRIM6-TRIM34B2RNG4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30■■■□□ 2.39
TRIM6-TRIM34B2RNG4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30■■■□□ 2.39
TRIM6-TRIM34B2RNG4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30■■■□□ 2.39
TRIM6-TRIM34B2RNG4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30■■■□□ 2.39
TRIM6-TRIM34B2RNG4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
TRIM6-TRIM34B2RNG4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
TRIM6-TRIM34B2RNG4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
TRIM6-TRIM34B2RNG4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30■■■□□ 2.39
TRIM6-TRIM34B2RNG4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC30■■■□□ 2.39
TRIM6-TRIM34B2RNG4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC29.99■■■□□ 2.39
TRIM6-TRIM34B2RNG4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
TRIM6-TRIM34B2RNG4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC29.99■■■□□ 2.39
TRIM6-TRIM34B2RNG4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC29.99■■■□□ 2.39
TRIM6-TRIM34B2RNG4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
TRIM6-TRIM34B2RNG4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
TRIM6-TRIM34B2RNG4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC29.97■■■□□ 2.39
TRIM6-TRIM34B2RNG4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
TRIM6-TRIM34B2RNG4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
TRIM6-TRIM34B2RNG4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
TRIM6-TRIM34B2RNG4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
TRIM6-TRIM34B2RNG4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
TRIM6-TRIM34B2RNG4 AC126177.7-201ENST00000547904 679 ntBASIC29.96■■■□□ 2.39
TRIM6-TRIM34B2RNG4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
TRIM6-TRIM34B2RNG4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC29.95■■■□□ 2.39
TRIM6-TRIM34B2RNG4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.95■■■□□ 2.39
TRIM6-TRIM34B2RNG4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC29.95■■■□□ 2.38
TRIM6-TRIM34B2RNG4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
TRIM6-TRIM34B2RNG4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
TRIM6-TRIM34B2RNG4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
TRIM6-TRIM34B2RNG4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
TRIM6-TRIM34B2RNG4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
TRIM6-TRIM34B2RNG4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
TRIM6-TRIM34B2RNG4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
TRIM6-TRIM34B2RNG4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC29.92■■■□□ 2.38
TRIM6-TRIM34B2RNG4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC29.92■■■□□ 2.38
TRIM6-TRIM34B2RNG4 AL359504.2-201ENST00000605506 1601 ntBASIC29.92■■■□□ 2.38
TRIM6-TRIM34B2RNG4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
TRIM6-TRIM34B2RNG4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
TRIM6-TRIM34B2RNG4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.91■■■□□ 2.38
TRIM6-TRIM34B2RNG4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC29.91■■■□□ 2.38
TRIM6-TRIM34B2RNG4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC29.91■■■□□ 2.38
TRIM6-TRIM34B2RNG4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC29.9■■■□□ 2.38
TRIM6-TRIM34B2RNG4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
TRIM6-TRIM34B2RNG4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.9■■■□□ 2.38
TRIM6-TRIM34B2RNG4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
TRIM6-TRIM34B2RNG4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC29.89■■■□□ 2.38
TRIM6-TRIM34B2RNG4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
TRIM6-TRIM34B2RNG4 AC091060.1-201ENST00000623524 1766 ntBASIC29.89■■■□□ 2.38
TRIM6-TRIM34B2RNG4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
TRIM6-TRIM34B2RNG4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
TRIM6-TRIM34B2RNG4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
TRIM6-TRIM34B2RNG4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
TRIM6-TRIM34B2RNG4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC29.87■■■□□ 2.37
TRIM6-TRIM34B2RNG4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
TRIM6-TRIM34B2RNG4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
TRIM6-TRIM34B2RNG4 MIR4449-201ENST00000578365 66 ntBASIC29.86■■■□□ 2.37
TRIM6-TRIM34B2RNG4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
TRIM6-TRIM34B2RNG4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
TRIM6-TRIM34B2RNG4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
TRIM6-TRIM34B2RNG4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
TRIM6-TRIM34B2RNG4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
TRIM6-TRIM34B2RNG4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
TRIM6-TRIM34B2RNG4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
TRIM6-TRIM34B2RNG4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
TRIM6-TRIM34B2RNG4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC29.85■■■□□ 2.37
TRIM6-TRIM34B2RNG4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC29.84■■■□□ 2.37
TRIM6-TRIM34B2RNG4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
TRIM6-TRIM34B2RNG4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
TRIM6-TRIM34B2RNG4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC29.84■■■□□ 2.37
TRIM6-TRIM34B2RNG4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC29.83■■■□□ 2.37
TRIM6-TRIM34B2RNG4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
TRIM6-TRIM34B2RNG4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC29.83■■■□□ 2.37
TRIM6-TRIM34B2RNG4 AC060814.1-201ENST00000554326 538 ntBASIC29.83■■■□□ 2.37
TRIM6-TRIM34B2RNG4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC29.83■■■□□ 2.37
TRIM6-TRIM34B2RNG4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.83■■■□□ 2.37
TRIM6-TRIM34B2RNG4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.37
TRIM6-TRIM34B2RNG4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
TRIM6-TRIM34B2RNG4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
TRIM6-TRIM34B2RNG4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC29.81■■■□□ 2.36
TRIM6-TRIM34B2RNG4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC29.8■■■□□ 2.36
TRIM6-TRIM34B2RNG4 AC092803.2-201ENST00000564287 1899 ntBASIC29.8■■■□□ 2.36
TRIM6-TRIM34B2RNG4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TRIM6-TRIM34B2RNG4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TRIM6-TRIM34B2RNG4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC29.8■■■□□ 2.36
TRIM6-TRIM34B2RNG4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
TRIM6-TRIM34B2RNG4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
TRIM6-TRIM34B2RNG4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TRIM6-TRIM34B2RNG4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
TRIM6-TRIM34B2RNG4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29.79■■■□□ 2.36
TRIM6-TRIM34B2RNG4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
TRIM6-TRIM34B2RNG4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
TRIM6-TRIM34B2RNG4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC29.79■■■□□ 2.36
TRIM6-TRIM34B2RNG4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC29.79■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms