Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM4A7MD48 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM4A7MD48 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM4A7MD48 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM4A7MD48 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM4A7MD48 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SRRM4A7MD48 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM4A7MD48 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.74■□□□□ 0.75
SRRM4A7MD48 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.74■□□□□ 0.75
SRRM4A7MD48 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
SRRM4A7MD48 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM4A7MD48 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM4A7MD48 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM4A7MD48 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM4A7MD48 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM4A7MD48 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM4A7MD48 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM4A7MD48 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM4A7MD48 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.73■□□□□ 0.75
SRRM4A7MD48 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.73■□□□□ 0.75
SRRM4A7MD48 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.73■□□□□ 0.75
SRRM4A7MD48 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM4A7MD48 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM4A7MD48 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM4A7MD48 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM4A7MD48 DUSP8P4-201ENST00000399538 1761 ntBASIC19.72■□□□□ 0.75
SRRM4A7MD48 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRRM4A7MD48 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRRM4A7MD48 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SRRM4A7MD48 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRRM4A7MD48 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRRM4A7MD48 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRRM4A7MD48 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRRM4A7MD48 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRRM4A7MD48 AC016575.1-201ENST00000607026 382 ntBASIC19.72■□□□□ 0.75
SRRM4A7MD48 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.72■□□□□ 0.75
SRRM4A7MD48 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SRRM4A7MD48 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SRRM4A7MD48 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRRM4A7MD48 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
SRRM4A7MD48 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM4A7MD48 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM4A7MD48 AL359258.2-201ENST00000564063 1566 ntBASIC19.71■□□□□ 0.75
SRRM4A7MD48 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM4A7MD48 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SRRM4A7MD48 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM4A7MD48 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SRRM4A7MD48 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SRRM4A7MD48 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SRRM4A7MD48 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.7■□□□□ 0.74
SRRM4A7MD48 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SRRM4A7MD48 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.7■□□□□ 0.74
SRRM4A7MD48 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SRRM4A7MD48 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRRM4A7MD48 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRRM4A7MD48 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRRM4A7MD48 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.69■□□□□ 0.74
SRRM4A7MD48 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRRM4A7MD48 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.69■□□□□ 0.74
SRRM4A7MD48 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SRRM4A7MD48 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SRRM4A7MD48 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.69■□□□□ 0.74
SRRM4A7MD48 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
SRRM4A7MD48 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SRRM4A7MD48 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRRM4A7MD48 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.68■□□□□ 0.74
SRRM4A7MD48 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
SRRM4A7MD48 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRRM4A7MD48 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SRRM4A7MD48 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SRRM4A7MD48 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SRRM4A7MD48 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRRM4A7MD48 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.67■□□□□ 0.74
SRRM4A7MD48 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SRRM4A7MD48 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRRM4A7MD48 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.67■□□□□ 0.74
SRRM4A7MD48 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRRM4A7MD48 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SRRM4A7MD48 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRRM4A7MD48 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRRM4A7MD48 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRRM4A7MD48 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRRM4A7MD48 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.66■□□□□ 0.74
SRRM4A7MD48 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SRRM4A7MD48 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SRRM4A7MD48 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRRM4A7MD48 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.66■□□□□ 0.74
SRRM4A7MD48 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRRM4A7MD48 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SRRM4A7MD48 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SRRM4A7MD48 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRRM4A7MD48 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRRM4A7MD48 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRRM4A7MD48 MIR7108-201ENST00000614319 87 ntBASIC19.65■□□□□ 0.74
SRRM4A7MD48 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.65■□□□□ 0.74
SRRM4A7MD48 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRRM4A7MD48 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SRRM4A7MD48 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.65■□□□□ 0.74
SRRM4A7MD48 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SRRM4A7MD48 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms