Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM238LA0A1B0GVL6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM238LA0A1B0GVL6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM238LA0A1B0GVL6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM238LA0A1B0GVL6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM238LA0A1B0GVL6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM238LA0A1B0GVL6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM238LA0A1B0GVL6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.34
TMEM238LA0A1B0GVL6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM238LA0A1B0GVL6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM238LA0A1B0GVL6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM238LA0A1B0GVL6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM238LA0A1B0GVL6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM238LA0A1B0GVL6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM238LA0A1B0GVL6 AC133561.1-201ENST00000568600 2415 ntBASIC17.13■□□□□ 0.33
TMEM238LA0A1B0GVL6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM238LA0A1B0GVL6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
TMEM238LA0A1B0GVL6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
TMEM238LA0A1B0GVL6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM238LA0A1B0GVL6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM238LA0A1B0GVL6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM238LA0A1B0GVL6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TMEM238LA0A1B0GVL6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM238LA0A1B0GVL6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.12■□□□□ 0.33
TMEM238LA0A1B0GVL6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM238LA0A1B0GVL6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM238LA0A1B0GVL6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM238LA0A1B0GVL6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC17.11■□□□□ 0.33
TMEM238LA0A1B0GVL6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM238LA0A1B0GVL6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TMEM238LA0A1B0GVL6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEM238LA0A1B0GVL6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM238LA0A1B0GVL6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM238LA0A1B0GVL6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM238LA0A1B0GVL6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM238LA0A1B0GVL6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM238LA0A1B0GVL6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM238LA0A1B0GVL6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM238LA0A1B0GVL6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TMEM238LA0A1B0GVL6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
TMEM238LA0A1B0GVL6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.09■□□□□ 0.33
TMEM238LA0A1B0GVL6 MVK-208ENST00000539696 608 ntTSL 5 BASIC17.09■□□□□ 0.33
TMEM238LA0A1B0GVL6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TMEM238LA0A1B0GVL6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM238LA0A1B0GVL6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM238LA0A1B0GVL6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TMEM238LA0A1B0GVL6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM238LA0A1B0GVL6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEM238LA0A1B0GVL6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TMEM238LA0A1B0GVL6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.08■□□□□ 0.33
TMEM238LA0A1B0GVL6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM238LA0A1B0GVL6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TMEM238LA0A1B0GVL6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM238LA0A1B0GVL6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.08■□□□□ 0.33
TMEM238LA0A1B0GVL6 DUSP8P4-201ENST00000399538 1761 ntBASIC17.08■□□□□ 0.33
TMEM238LA0A1B0GVL6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM238LA0A1B0GVL6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TMEM238LA0A1B0GVL6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM238LA0A1B0GVL6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
TMEM238LA0A1B0GVL6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM238LA0A1B0GVL6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TMEM238LA0A1B0GVL6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM238LA0A1B0GVL6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM238LA0A1B0GVL6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM238LA0A1B0GVL6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.07■□□□□ 0.32
TMEM238LA0A1B0GVL6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TMEM238LA0A1B0GVL6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM238LA0A1B0GVL6 AC079834.2-201ENST00000609776 1949 ntBASIC17.07■□□□□ 0.32
TMEM238LA0A1B0GVL6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM238LA0A1B0GVL6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM238LA0A1B0GVL6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.07■□□□□ 0.32
TMEM238LA0A1B0GVL6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM238LA0A1B0GVL6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.07■□□□□ 0.32
TMEM238LA0A1B0GVL6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM238LA0A1B0GVL6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM238LA0A1B0GVL6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM238LA0A1B0GVL6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM238LA0A1B0GVL6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM238LA0A1B0GVL6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM238LA0A1B0GVL6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM238LA0A1B0GVL6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC17.06■□□□□ 0.32
TMEM238LA0A1B0GVL6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM238LA0A1B0GVL6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM238LA0A1B0GVL6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TMEM238LA0A1B0GVL6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TMEM238LA0A1B0GVL6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM238LA0A1B0GVL6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM238LA0A1B0GVL6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM238LA0A1B0GVL6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM238LA0A1B0GVL6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM238LA0A1B0GVL6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM238LA0A1B0GVL6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM238LA0A1B0GVL6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM238LA0A1B0GVL6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TMEM238LA0A1B0GVL6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC17.04■□□□□ 0.32
TMEM238LA0A1B0GVL6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM238LA0A1B0GVL6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM238LA0A1B0GVL6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
TMEM238LA0A1B0GVL6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
TMEM238LA0A1B0GVL6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms