Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 AC007029.1-201ENST00000604183 313 ntBASIC18.46■□□□□ 0.55
TRAV25A0A0B4J276 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV25A0A0B4J276 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV25A0A0B4J276 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRAV25A0A0B4J276 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV25A0A0B4J276 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV25A0A0B4J276 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV25A0A0B4J276 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.45■□□□□ 0.54
TRAV25A0A0B4J276 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRAV25A0A0B4J276 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV25A0A0B4J276 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV25A0A0B4J276 RP9P-202ENST00000450133 1212 ntBASIC18.44■□□□□ 0.54
TRAV25A0A0B4J276 ABHD17AP5-201ENST00000580133 923 ntBASIC18.44■□□□□ 0.54
TRAV25A0A0B4J276 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TRAV25A0A0B4J276 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TRAV25A0A0B4J276 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV25A0A0B4J276 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV25A0A0B4J276 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.43■□□□□ 0.54
TRAV25A0A0B4J276 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV25A0A0B4J276 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV25A0A0B4J276 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV25A0A0B4J276 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV25A0A0B4J276 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV25A0A0B4J276 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV25A0A0B4J276 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV25A0A0B4J276 AP004609.3-201ENST00000610705 1884 ntBASIC18.41■□□□□ 0.54
TRAV25A0A0B4J276 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV25A0A0B4J276 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRAV25A0A0B4J276 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV25A0A0B4J276 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
TRAV25A0A0B4J276 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRAV25A0A0B4J276 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRAV25A0A0B4J276 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV25A0A0B4J276 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRAV25A0A0B4J276 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.39■□□□□ 0.54
TRAV25A0A0B4J276 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV25A0A0B4J276 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
TRAV25A0A0B4J276 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV25A0A0B4J276 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.38■□□□□ 0.53
TRAV25A0A0B4J276 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV25A0A0B4J276 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.38■□□□□ 0.53
TRAV25A0A0B4J276 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRAV25A0A0B4J276 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAV25A0A0B4J276 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV25A0A0B4J276 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV25A0A0B4J276 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV25A0A0B4J276 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV25A0A0B4J276 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV25A0A0B4J276 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.37■□□□□ 0.53
TRAV25A0A0B4J276 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRAV25A0A0B4J276 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.37■□□□□ 0.53
TRAV25A0A0B4J276 AC093536.1-201ENST00000569153 554 ntBASIC18.37■□□□□ 0.53
TRAV25A0A0B4J276 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAV25A0A0B4J276 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRAV25A0A0B4J276 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.37■□□□□ 0.53
TRAV25A0A0B4J276 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRAV25A0A0B4J276 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV25A0A0B4J276 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV25A0A0B4J276 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
TRAV25A0A0B4J276 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAV25A0A0B4J276 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
TRAV25A0A0B4J276 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV25A0A0B4J276 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV25A0A0B4J276 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV25A0A0B4J276 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV25A0A0B4J276 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV25A0A0B4J276 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.35■□□□□ 0.53
TRAV25A0A0B4J276 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV25A0A0B4J276 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TRAV25A0A0B4J276 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV25A0A0B4J276 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAV25A0A0B4J276 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV25A0A0B4J276 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV25A0A0B4J276 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV25A0A0B4J276 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV25A0A0B4J276 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV25A0A0B4J276 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV25A0A0B4J276 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV25A0A0B4J276 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TRAV25A0A0B4J276 NTF6A-201ENST00000591175 560 ntBASIC18.33■□□□□ 0.52
TRAV25A0A0B4J276 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.33■□□□□ 0.52
TRAV25A0A0B4J276 AC026202.3-201ENST00000600805 1127 ntBASIC18.33■□□□□ 0.52
TRAV25A0A0B4J276 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV25A0A0B4J276 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV25A0A0B4J276 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV25A0A0B4J276 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.33■□□□□ 0.52
TRAV25A0A0B4J276 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV25A0A0B4J276 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TRAV25A0A0B4J276 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV25A0A0B4J276 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV25A0A0B4J276 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRAV25A0A0B4J276 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV25A0A0B4J276 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.32■□□□□ 0.52
TRAV25A0A0B4J276 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV25A0A0B4J276 AC133552.2-201ENST00000619106 1032 ntBASIC18.32■□□□□ 0.52
TRAV25A0A0B4J276 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAV25A0A0B4J276 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TRAV25A0A0B4J276 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV25A0A0B4J276 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV25A0A0B4J276 RAP2CP1-202ENST00000605179 643 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms