Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV34A0A0B4J273 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TRAV34A0A0B4J273 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV34A0A0B4J273 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV34A0A0B4J273 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.77■□□□□ 0.6
TRAV34A0A0B4J273 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV34A0A0B4J273 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV34A0A0B4J273 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV34A0A0B4J273 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
TRAV34A0A0B4J273 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRAV34A0A0B4J273 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV34A0A0B4J273 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.76■□□□□ 0.59
TRAV34A0A0B4J273 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV34A0A0B4J273 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.76■□□□□ 0.59
TRAV34A0A0B4J273 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV34A0A0B4J273 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV34A0A0B4J273 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV34A0A0B4J273 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV34A0A0B4J273 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV34A0A0B4J273 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV34A0A0B4J273 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV34A0A0B4J273 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV34A0A0B4J273 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV34A0A0B4J273 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV34A0A0B4J273 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV34A0A0B4J273 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV34A0A0B4J273 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV34A0A0B4J273 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV34A0A0B4J273 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAV34A0A0B4J273 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRAV34A0A0B4J273 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.73■□□□□ 0.59
TRAV34A0A0B4J273 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV34A0A0B4J273 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAV34A0A0B4J273 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV34A0A0B4J273 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV34A0A0B4J273 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV34A0A0B4J273 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV34A0A0B4J273 ERN1-208ENST00000606895 2068 ntBASIC18.72■□□□□ 0.59
TRAV34A0A0B4J273 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV34A0A0B4J273 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV34A0A0B4J273 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.71■□□□□ 0.59
TRAV34A0A0B4J273 MIR762-201ENST00000390236 83 ntBASIC18.71■□□□□ 0.59
TRAV34A0A0B4J273 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TRAV34A0A0B4J273 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV34A0A0B4J273 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRAV34A0A0B4J273 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.69■□□□□ 0.58
TRAV34A0A0B4J273 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRAV34A0A0B4J273 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV34A0A0B4J273 AC136428.2-201ENST00000563187 214 ntBASIC18.69■□□□□ 0.58
TRAV34A0A0B4J273 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAV34A0A0B4J273 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV34A0A0B4J273 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV34A0A0B4J273 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV34A0A0B4J273 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV34A0A0B4J273 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV34A0A0B4J273 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV34A0A0B4J273 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV34A0A0B4J273 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV34A0A0B4J273 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV34A0A0B4J273 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV34A0A0B4J273 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRAV34A0A0B4J273 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.68■□□□□ 0.58
TRAV34A0A0B4J273 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV34A0A0B4J273 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV34A0A0B4J273 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV34A0A0B4J273 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV34A0A0B4J273 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV34A0A0B4J273 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV34A0A0B4J273 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV34A0A0B4J273 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV34A0A0B4J273 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV34A0A0B4J273 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV34A0A0B4J273 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRAV34A0A0B4J273 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV34A0A0B4J273 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV34A0A0B4J273 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAV34A0A0B4J273 AC142472.1-201ENST00000612013 1741 ntBASIC18.66■□□□□ 0.58
TRAV34A0A0B4J273 LINC00273-201ENST00000539813 1452 ntBASIC18.66■□□□□ 0.58
TRAV34A0A0B4J273 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV34A0A0B4J273 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.66■□□□□ 0.58
TRAV34A0A0B4J273 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRAV34A0A0B4J273 AC097358.2-201ENST00000607541 1159 ntBASIC18.66■□□□□ 0.58
TRAV34A0A0B4J273 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV34A0A0B4J273 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV34A0A0B4J273 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV34A0A0B4J273 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TRAV34A0A0B4J273 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRAV34A0A0B4J273 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV34A0A0B4J273 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV34A0A0B4J273 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAV34A0A0B4J273 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV34A0A0B4J273 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAV34A0A0B4J273 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRAV34A0A0B4J273 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV34A0A0B4J273 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV34A0A0B4J273 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV34A0A0B4J273 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV34A0A0B4J273 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.64■□□□□ 0.58
TRAV34A0A0B4J273 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.64■□□□□ 0.58
TRAV34A0A0B4J273 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms