Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV12-3A0A0B4J271 AC145676.1-201ENST00000514988 2004 ntBASIC18.11■□□□□ 0.49
TRAV12-3A0A0B4J271 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
TRAV12-3A0A0B4J271 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV12-3A0A0B4J271 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAV12-3A0A0B4J271 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV12-3A0A0B4J271 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV12-3A0A0B4J271 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV12-3A0A0B4J271 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV12-3A0A0B4J271 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TRAV12-3A0A0B4J271 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV12-3A0A0B4J271 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV12-3A0A0B4J271 MIR219A2-201ENST00000608502 1504 ntBASIC18.1■□□□□ 0.49
TRAV12-3A0A0B4J271 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV12-3A0A0B4J271 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV12-3A0A0B4J271 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV12-3A0A0B4J271 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRAV12-3A0A0B4J271 AC092803.2-201ENST00000564287 1899 ntBASIC18.09■□□□□ 0.49
TRAV12-3A0A0B4J271 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV12-3A0A0B4J271 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV12-3A0A0B4J271 ABHD17AP4-201ENST00000411545 909 ntBASIC18.09■□□□□ 0.49
TRAV12-3A0A0B4J271 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV12-3A0A0B4J271 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.09■□□□□ 0.49
TRAV12-3A0A0B4J271 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV12-3A0A0B4J271 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV12-3A0A0B4J271 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV12-3A0A0B4J271 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV12-3A0A0B4J271 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV12-3A0A0B4J271 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV12-3A0A0B4J271 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV12-3A0A0B4J271 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAV12-3A0A0B4J271 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.08■□□□□ 0.48
TRAV12-3A0A0B4J271 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV12-3A0A0B4J271 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV12-3A0A0B4J271 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV12-3A0A0B4J271 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.08■□□□□ 0.48
TRAV12-3A0A0B4J271 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.08■□□□□ 0.48
TRAV12-3A0A0B4J271 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV12-3A0A0B4J271 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV12-3A0A0B4J271 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV12-3A0A0B4J271 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.07■□□□□ 0.48
TRAV12-3A0A0B4J271 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV12-3A0A0B4J271 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV12-3A0A0B4J271 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV12-3A0A0B4J271 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV12-3A0A0B4J271 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRAV12-3A0A0B4J271 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAV12-3A0A0B4J271 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV12-3A0A0B4J271 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAV12-3A0A0B4J271 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV12-3A0A0B4J271 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRAV12-3A0A0B4J271 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV12-3A0A0B4J271 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV12-3A0A0B4J271 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV12-3A0A0B4J271 HLA-V-202ENST00000446817 847 ntBASIC18.05■□□□□ 0.48
TRAV12-3A0A0B4J271 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV12-3A0A0B4J271 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV12-3A0A0B4J271 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV12-3A0A0B4J271 AC148477.6-201ENST00000623746 465 ntBASIC18.05■□□□□ 0.48
TRAV12-3A0A0B4J271 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV12-3A0A0B4J271 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV12-3A0A0B4J271 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV12-3A0A0B4J271 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV12-3A0A0B4J271 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV12-3A0A0B4J271 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAV12-3A0A0B4J271 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV12-3A0A0B4J271 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV12-3A0A0B4J271 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV12-3A0A0B4J271 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
TRAV12-3A0A0B4J271 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV12-3A0A0B4J271 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV12-3A0A0B4J271 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV12-3A0A0B4J271 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV12-3A0A0B4J271 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV12-3A0A0B4J271 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.03■□□□□ 0.48
TRAV12-3A0A0B4J271 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV12-3A0A0B4J271 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRAV12-3A0A0B4J271 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV12-3A0A0B4J271 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV12-3A0A0B4J271 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV12-3A0A0B4J271 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TRAV12-3A0A0B4J271 CR559946.2-201ENST00000623684 991 ntBASIC18.02■□□□□ 0.48
TRAV12-3A0A0B4J271 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV12-3A0A0B4J271 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
TRAV12-3A0A0B4J271 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV12-3A0A0B4J271 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV12-3A0A0B4J271 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV12-3A0A0B4J271 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV12-3A0A0B4J271 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
TRAV12-3A0A0B4J271 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV12-3A0A0B4J271 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAV12-3A0A0B4J271 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV12-3A0A0B4J271 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV12-3A0A0B4J271 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TRAV12-3A0A0B4J271 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV12-3A0A0B4J271 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV12-3A0A0B4J271 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV12-3A0A0B4J271 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV12-3A0A0B4J271 DUSP8P4-201ENST00000399538 1761 ntBASIC18.01■□□□□ 0.47
TRAV12-3A0A0B4J271 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms