Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.76■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.75■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.75■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.74■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 MIR639-201ENST00000384974 98 ntBASIC21.73■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.73■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.72■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 AC092803.2-201ENST00000564287 1899 ntBASIC21.71■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
IGKV1D-43A0A0B4J1Z2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.7■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 AL359504.2-201ENST00000605506 1601 ntBASIC21.69■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.69■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.68■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 AC145676.1-201ENST00000514988 2004 ntBASIC21.68■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.67■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.67■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.66■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
IGKV1D-43A0A0B4J1Z2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 DUSP8P4-201ENST00000399538 1761 ntBASIC21.64■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 AC126177.7-201ENST00000547904 679 ntBASIC21.62■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.62■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 ERN1-208ENST00000606895 2068 ntBASIC21.62■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms