Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV16A0A0A6YYK6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV16A0A0A6YYK6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV16A0A0A6YYK6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRAV16A0A0A6YYK6 MIR6090-201ENST00000622481 60 ntBASIC16.9■□□□□ 0.3
TRAV16A0A0A6YYK6 AP004833.2-201ENST00000532228 1454 ntBASIC16.9■□□□□ 0.3
TRAV16A0A0A6YYK6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
TRAV16A0A0A6YYK6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV16A0A0A6YYK6 DUX4L29-201ENST00000425409 679 ntBASIC16.89■□□□□ 0.29
TRAV16A0A0A6YYK6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV16A0A0A6YYK6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV16A0A0A6YYK6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV16A0A0A6YYK6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV16A0A0A6YYK6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV16A0A0A6YYK6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV16A0A0A6YYK6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV16A0A0A6YYK6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
TRAV16A0A0A6YYK6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV16A0A0A6YYK6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV16A0A0A6YYK6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRAV16A0A0A6YYK6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV16A0A0A6YYK6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV16A0A0A6YYK6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV16A0A0A6YYK6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV16A0A0A6YYK6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV16A0A0A6YYK6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV16A0A0A6YYK6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV16A0A0A6YYK6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV16A0A0A6YYK6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
TRAV16A0A0A6YYK6 AC127502.1-201ENST00000399971 1502 ntBASIC16.86■□□□□ 0.29
TRAV16A0A0A6YYK6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV16A0A0A6YYK6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC16.86■□□□□ 0.29
TRAV16A0A0A6YYK6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV16A0A0A6YYK6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV16A0A0A6YYK6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRAV16A0A0A6YYK6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV16A0A0A6YYK6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV16A0A0A6YYK6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV16A0A0A6YYK6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV16A0A0A6YYK6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV16A0A0A6YYK6 DUSP8P4-201ENST00000399538 1761 ntBASIC16.85■□□□□ 0.29
TRAV16A0A0A6YYK6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV16A0A0A6YYK6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV16A0A0A6YYK6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV16A0A0A6YYK6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV16A0A0A6YYK6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV16A0A0A6YYK6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV16A0A0A6YYK6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV16A0A0A6YYK6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC16.84■□□□□ 0.29
TRAV16A0A0A6YYK6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC16.84■□□□□ 0.29
TRAV16A0A0A6YYK6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC16.84■□□□□ 0.29
TRAV16A0A0A6YYK6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV16A0A0A6YYK6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRAV16A0A0A6YYK6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV16A0A0A6YYK6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV16A0A0A6YYK6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV16A0A0A6YYK6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
TRAV16A0A0A6YYK6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV16A0A0A6YYK6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV16A0A0A6YYK6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV16A0A0A6YYK6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV16A0A0A6YYK6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRAV16A0A0A6YYK6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV16A0A0A6YYK6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV16A0A0A6YYK6 AC012676.1-201ENST00000574705 1949 ntBASIC16.83■□□□□ 0.28
TRAV16A0A0A6YYK6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV16A0A0A6YYK6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRAV16A0A0A6YYK6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV16A0A0A6YYK6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRAV16A0A0A6YYK6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAV16A0A0A6YYK6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAV16A0A0A6YYK6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC16.82■□□□□ 0.28
TRAV16A0A0A6YYK6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV16A0A0A6YYK6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV16A0A0A6YYK6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV16A0A0A6YYK6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV16A0A0A6YYK6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV16A0A0A6YYK6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV16A0A0A6YYK6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRAV16A0A0A6YYK6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV16A0A0A6YYK6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV16A0A0A6YYK6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV16A0A0A6YYK6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV16A0A0A6YYK6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV16A0A0A6YYK6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV16A0A0A6YYK6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV16A0A0A6YYK6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV16A0A0A6YYK6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV16A0A0A6YYK6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRAV16A0A0A6YYK6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV16A0A0A6YYK6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRAV16A0A0A6YYK6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV16A0A0A6YYK6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV16A0A0A6YYK6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRAV16A0A0A6YYK6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV16A0A0A6YYK6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TRAV16A0A0A6YYK6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV16A0A0A6YYK6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV16A0A0A6YYK6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRAV16A0A0A6YYK6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms